Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03365 and BL02770

See Amino acid alignment / Visit BSNT_03365 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:11
# Commandline: needle
#    -asequence dna-align/BSNT_03365___trpA.1.5803.seq
#    -bsequence dna-align/BL02770___trpA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03365___trpA-BL02770___trpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03365___trpA-BL02770___trpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03365___trpA
# 2: BL02770___trpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 838
# Identity:     576/838 (68.7%)
# Similarity:   576/838 (68.7%)
# Gaps:          68/838 ( 8.1%)
# Score: 1889.5
# 
#
#=======================================

BSNT_03365___      1 ATGTTTAAATTGGATCTTCAACCAACA-------GAAAAATTGTTTATCC     43
                     |||||.||..||       ||..||||       ||.||..|.|||.|.|
BL02770___trp      1 ATGTTCAATCTG-------AAAAAACAGCCGTCCGATAAGCTATTTGTTC     43

BSNT_03365___     44 CGTTTATTACGGCGGGCGATCCAGTTCCTGAGGTTTCGATTGAACTGGCG     93
                     ||||||||||.|||||.||.||..|.||.||..|.|||||.||.|||||.
BL02770___trp     44 CGTTTATTACAGCGGGAGACCCGCTGCCAGAAATCTCGATCGAGCTGGCA     93

BSNT_03365___     94 AAGTCACTCCAAAAAGCAGGCGCCACAGCATTGGAGCTTGGTGTTGCATA    143
                     ||.||.||.|||.|.||.||.||..|.||..|.||.||.||.|||.|.||
BL02770___trp     94 AAATCTCTTCAAGAGGCGGGAGCGTCCGCCCTTGAACTCGGGGTTCCGTA    143

BSNT_03365___    144 CTCTGACCCGCTTGCAGACGGTCCGGTGATCCAGAGGGCTTCAAAGCGGG    193
                     .|||||.|||||.||.|||||.||||||||.|||.|.||.|||||..|||
BL02770___trp    144 TTCTGATCCGCTCGCTGACGGCCCGGTGATTCAGCGCGCATCAAAAAGGG    193

BSNT_03365___    194 CACTTGATCAAGGA-ATGAATATCGTAAAGGCAATC-GAATTAGGCGGAG    241
                     |.||||| |||.|| |||||.||||||||.||.||| |..|| |||||.|
BL02770___trp    194 CGCTTGA-CAACGATATGAACATCGTAAAAGCGATCAGGCTT-GGCGGTG    241

BSNT_03365___    242 AAATGAAAAAAAACGGAGTGAATATTCCGATTATCCTCTTTACGTATTAT    291
                     ||||||||||||||||.||..|||||||||||||.|||||||||||||||
BL02770___trp    242 AAATGAAAAAAAACGGCGTCCATATTCCGATTATTCTCTTTACGTATTAT    291

BSNT_03365___    292 AATCCTGTGTTACAATTGAACAAAGAATACTTTTTCGCTTTACTGCAGGA    341
                     |||||||||||||||||..|.|.|||..||||||||||||||||||...|
BL02770___trp    292 AATCCTGTGTTACAATTAGATACAGATCACTTTTTCGCTTTACTGCGACA    341

BSNT_03365___    342 AAATCATATTGACGGTCTGCTTGTTCCGGATCTGCCACTAGAAGAAAGC-    390
                     ||||||..|.|||||.||.|||||.|||||.||.||..|.||.|||||| 
BL02770___trp    342 AAATCAGCTAGACGGACTCCTTGTACCGGACCTTCCTTTTGAGGAAAGCG    391

BSNT_03365___    391 ------AACAGCCTTCAAGAGGAATGTAAAAGCCATGAGGTGACGTATAT    434
                           ..||||       ||.|.|||||||..||.|.|.|.||.|||||
BL02770___trp    392 TATATTTGCAGC-------AGCAGTGTAAAAAACACGGGATTACCTATAT    434

BSNT_03365___    435 TTCTTTGGTTGCGCCGACAAGCGAAAGCCG--TTTGAAAACCATTATTGA    482
                     |||..||||.|||||||||||||||...||  ||..||||  ||.|...|
BL02770___trp    435 TTCGCTGGTCGCGCCGACAAGCGAATCGCGCATTCAAAAA--ATAACGCA    482

BSNT_03365___    483 ACAAGCCGAGGGCTTCGTCTACTGTGTGTCTTCTCTGGGTGTGACCGGTG    532
                     .||.||.||.||.||.||.||.||.||.|||||.||.|||||.||.||||
BL02770___trp    483 GCAGGCGGAAGGTTTTGTGTATTGCGTTTCTTCGCTCGGTGTCACAGGTG    532

BSNT_03365___    533 TCCGCAATGAGTTC---AATTCATCCGTGTACCCGTTCATT----CGGAC    575
                     |.||||||||.|||   .||||     |||..|  ||||||    .||.|
BL02770___trp    533 TGCGCAATGAATTCGAAGATTC-----TGTTTC--TTCATTTATCAGGTC    575

BSNT_03365___    576 AGTGAA--GAATCTCAGCACTGTTCCGGTCGCTGTAGGGTTCGGTATAT-    622
                     .||.||  |||  |.|||.|.||.|||||.||.||.|||||.||.||.| 
BL02770___trp    576 TGTTAAAGGAA--TGAGCTCCGTCCCGGTTGCCGTCGGGTTTGGGATTTC    623

BSNT_03365___    623 ------CAAACCGTGAACAGGTCATAAAGATGAATGAAATTAGTGACGGT    666
                           |||||    ||..||..||   ||||||||||.|....|||||.
BL02770___trp    624 CAGCTCCAAAC----AAGTGGAGAT---GATGAATGAACTGGCGGACGGC    666

BSNT_03365___    667 GTCGTAGTGGGAAGTGCGCTCGTCAGAAAAATAGAAGAATTAAAGGACCG    716
                     ||.||.||||||||.||.||.||||||||.||.||.||..|.||.|||..
BL02770___trp    667 GTTGTCGTGGGAAGCGCCCTTGTCAGAAAGATCGAGGAGCTGAAAGACGA    716

BSNT_03365___    717 GCTCATCAGCGCTGAAACGAGAAATCAGGCGCTGCAGGAGTTTGAGGATT    766
                     .|||.||..|.||||.||.||..|.||.||..|..|||.||||||||..|
BL02770___trp    717 ACTCGTCGCCCCTGAGACAAGGGAACAAGCCTTAAAGGCGTTTGAGGCAT    766

BSNT_03365___    767 ATGCAATGGCGTTTAGCGGCTTGTACAGTTTAAAATGA    804
                     |.||.|.|.|.||||||||.|.|||||...||||||||
BL02770___trp    767 ACGCTAAGACATTTAGCGGATCGTACATGGTAAAATGA    804


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03365 and BL02770

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
