Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03341 and BL02752

See DNA alignment / Visit BSNT_03341 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence pep-align/BSNT_03341___panB.1.5803.seq
#    -bsequence pep-align/BL02752___panB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03341___panB-BL02752___panB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03341___panB-BL02752___panB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03341___panB
# 2: BL02752___panB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     224/277 (80.9%)
# Similarity:   245/277 (88.4%)
# Gaps:           0/277 ( 0.0%)
# Score: 1150.0
# 
#
#=======================================

BSNT_03341___      1 MKTKLDFLKMKESEEPIVMLTAYDYPAAKLAEQAGVDMILVGDSLGMVVL     50
                     ||||.||||||:..||||||||||||||||||||||||||||||||||||
BL02752___pan      1 MKTKTDFLKMKQEGEPIVMLTAYDYPAAKLAEQAGVDMILVGDSLGMVVL     50

BSNT_03341___     51 GLDSTVGVTVADMIHHTKAVKRGAPNTFIVTDMPFMSYHLSKEDTLKNAA    100
                     ||||||.|||||||||||||||||.:||:||||||||||.|.|..|||||
BL02752___pan     51 GLDSTVSVTVADMIHHTKAVKRGAKDTFVVTDMPFMSYHCSLESALKNAA    100

BSNT_03341___    101 AIVQESGADALKLEGGEGVFESIRALTLGGIPVVSHLGLTPQSVGVLGGY    150
                     ||||||||||||||||:||||:|.|||.||||||||||||||||||||||
BL02752___pan    101 AIVQESGADALKLEGGDGVFETITALTRGGIPVVSHLGLTPQSVGVLGGY    150

BSNT_03341___    151 KVQGKDEQSAKKLIEDSIKCEEAGAMMLVLECVPAELTAKIADTLSIPVI    200
                     |||||||:||.||||||.:|||||||.||||||||.|..:|:..|:||||
BL02752___pan    151 KVQGKDEESAGKLIEDSRRCEEAGAMALVLECVPAALAERISKELTIPVI    200

BSNT_03341___    201 GIGAGVKADGQVLVYHDIIGHGVERTPKFVKQYTRIDETIETAISGYVQD    250
                     |||||...|||||||||::||||.|||||||||.:||:.:|.|:.|||:|
BL02752___pan    201 GIGAGAGTDGQVLVYHDVVGHGVSRTPKFVKQYAQIDQPLEQALRGYVED    250

BSNT_03341___    251 VRHRAFPEQKHSFQMNQTVLDGLYGGK    277
                     ||.|.|||..|||:::|.||:||||||
BL02752___pan    251 VRSRVFPEDAHSFRIDQQVLEGLYGGK    277


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.