Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03341 and BL02752
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence dna-align/BSNT_03341___panB.1.5803.seq
# -bsequence dna-align/BL02752___panB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03341___panB-BL02752___panB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03341___panB-BL02752___panB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03341___panB
# 2: BL02752___panB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity: 619/858 (72.1%)
# Similarity: 619/858 (72.1%)
# Gaps: 48/858 ( 5.6%)
# Score: 2107.5
#
#
#=======================================
BSNT_03341___ 1 ATGAAAAC-AAAACTGGATTTTCTAAAAATGA---AGGAGTCTGAAGAAC 46
|||||.|| |||||| ||.||||||||||||| |.||| |.|||.|
BL02752___pan 1 ATGAAGACAAAAACT-GACTTTCTAAAAATGAAACAAGAG---GGAGAGC 46
BSNT_03341___ 47 CGATTGTCATGCTGACCGCTTATGATTATCCGGCAGCTAAACTTGCTGAA 96
||||.|||||||||||.||.||.|||||||||||.||.||.|||||.|||
BL02752___pan 47 CGATCGTCATGCTGACTGCCTACGATTATCCGGCGGCAAAGCTTGCCGAA 96
BSNT_03341___ 97 CAAGCGGGAGTTGACATGATTTTAGTCGGTGATTCACTCGGAATGGTCGT 146
||.||.||.||.||.|||||..|.|||||.|||||||||||.|||||.||
BL02752___pan 97 CAGGCCGGCGTCGATATGATCCTTGTCGGCGATTCACTCGGCATGGTTGT 146
BSNT_03341___ 147 CCTCGGCCTTGATTCAACTGTGGGTGTGACAGTTGCGGATATGATTCATC 196
.|||||||||||.||.||.||...|||.||.|||||.||||||||.||.|
BL02752___pan 147 ACTCGGCCTTGACTCGACCGTATCTGTTACGGTTGCTGATATGATCCACC 196
BSNT_03341___ 197 ATACAAAAGCCGTTAAAAGGGGTGCGCCGA----ATACCTTTATTGTGAC 242
||||||||||.||.|||.|.||.|| | ||||.|||.|||||||
BL02752___pan 197 ATACAAAAGCTGTCAAACGCGGGGC----AAAAGATACGTTTGTTGTGAC 242
BSNT_03341___ 243 AGATATGCCGTTTATGTCTTATCACCTG-TCCAAGGAAGATACGCTGAAA 291
.||||||||.||||||||.||||| ||| ||...||||....|.||||||
BL02752___pan 243 GGATATGCCTTTTATGTCATATCA-CTGCTCTTTGGAAAGCGCTCTGAAA 291
BSNT_03341___ 292 AATGCAGCGGCTATCGTTCAGGAAAGCGGAGCTGACGCACTGAAGCTTGA 341
|||||.|||||.||||||||.||||||||.||.||.||..||||||||||
BL02752___pan 292 AATGCCGCGGCGATCGTTCAAGAAAGCGGGGCAGATGCTTTGAAGCTTGA 341
BSNT_03341___ 342 GGGCGGAGAAGGCGTGTTTGAATCCATTCGC-GCATTGACGCTTGGAGGC 390
.|||||.||.||.||||||||..|.| ||.| ||.||.||.|..||.||.
BL02752___pan 342 AGGCGGCGACGGTGTGTTTGAGACGA-TCACGGCTTTAACACGCGGCGGA 390
BSNT_03341___ 391 ATTCCAGTAGTCAGTCACTTAGGTTTGACACCGCAGTCAGTCGGCGTACT 440
||.||.||.|||||.||.|||||.|||||.||.||.||.|||||.||..|
BL02752___pan 391 ATACCTGTTGTCAGCCATTTAGGCTTGACTCCTCAATCCGTCGGTGTTTT 440
BSNT_03341___ 441 GGGCGGCTATAAAGTACAGGGCAAAGACGAACAAAGCGCCAAAAAATTAA 490
|||.|||||||||||.||.||.|||||.|||.||||||||...||..|.|
BL02752___pan 441 GGGAGGCTATAAAGTTCAAGGGAAAGATGAAGAAAGCGCCGGCAAGCTGA 490
BSNT_03341___ 491 TAGAAGACAGTATAAAATGCGAAGAAGCAGGAGCTATGATGCTTGTGCTG 540
|.||||||||.|.....||.|||||||||||.||.|||..|||.||.|||
BL02752___pan 491 TTGAAGACAGCAGGCGCTGTGAAGAAGCAGGCGCGATGGCGCTCGTTCTG 540
BSNT_03341___ 541 GAATGTGTACCGGCAGAACTCACAGCCAAA---ATTGCCGATACGCTAAG 587
|||||.||.|||||||..||| ||..|| |||.|..|...|||.|.
BL02752___pan 541 GAATGCGTCCCGGCAGCGCTC---GCTGAACGGATTTCAAAGGAGCTCAC 587
BSNT_03341___ 588 CATACCGGTCATTGGAATCGGGGCGGGTG-TGAAAGCA--GACGGACAAG 634
.||.||.|||||.||.||.||.||.|||| || ||| ||||||||.|
BL02752___pan 588 AATTCCTGTCATCGGCATTGGAGCAGGTGCTG---GCACGGACGGACAGG 634
BSNT_03341___ 635 TTCTCGTTTATCATGATATTATCGGCCACGGTGTTGAG-AGAACACCTAA 683
||||||||||.||.|||.||.||||.|||||.| |.|| .|.||.|||||
BL02752___pan 635 TTCTCGTTTACCACGATGTTGTCGGACACGGAG-TAAGCCGGACGCCTAA 683
BSNT_03341___ 684 ATTTGTAAAGCAATATACGCGTATTGATGAAACCA-----TCGAAACAGC 728
||||||.|||||.|||.|.|..||.| |||| |.|||..|||
BL02752___pan 684 ATTTGTCAAGCAGTATGCACAAATCG-----ACCAGCCGCTTGAACAAGC 728
BSNT_03341___ 729 AATCAGCGGATATGTTCAGGATGTAAGA--CATCGTGCTTTCCCTGAACA 776
..|..|.|||||||||.|||||||.||| |..|||| ||.||||||.|
BL02752___pan 729 GCTTCGGGGATATGTTGAGGATGTCAGAAGCCGCGTG--TTTCCTGAAGA 776
BSNT_03341___ 777 AAAGCATTCCTTTCAAATGAACCAGACAGTGCTGGACGGCTTGTACGGGG 826
....|||||.||.|..||..|.|||..|||.||.||.||.||.|||||.|
BL02752___pan 777 TGCTCATTCGTTCCGTATAGATCAGCAAGTTCTTGAAGGATTATACGGAG 826
BSNT_03341___ 827 GAAAATAA 834
|.|||||.
BL02752___pan 827 GGAAATAG 834
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