Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03336 and BL02748

See DNA alignment / Visit BSNT_03336 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence pep-align/BSNT_03336___ypmA.1.5803.seq
#    -bsequence pep-align/BL02748___ypmA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03336___ypmA-BL02748___ypmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03336___ypmA-BL02748___ypmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03336___ypmA
# 2: BL02748___ypmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      46/56 (82.1%)
# Similarity:    54/56 (96.4%)
# Gaps:           0/56 ( 0.0%)
# Score: 240.0
# 
#
#=======================================

BSNT_03336___      1 MESKIEILSTINVEHSDDLYKIVDTLNRTLKRDNLMFGLALDEENKNQAV     50
                     ||:|||||||::||||:|||||||.||||||||:||||||||||::.||:
BL02748___ypm      1 MENKIEILSTVSVEHSEDLYKIVDLLNRTLKRDDLMFGLALDEEDQKQAI     50

BSNT_03336___     51 FTIYRT     56
                     ||||||
BL02748___ypm     51 FTIYRT     56


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