Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03336 and BL02748
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence dna-align/BSNT_03336___ypmA.1.5803.seq
# -bsequence dna-align/BL02748___ypmA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03336___ypmA-BL02748___ypmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03336___ypmA-BL02748___ypmA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03336___ypmA
# 2: BL02748___ypmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 171
# Identity: 133/171 (77.8%)
# Similarity: 133/171 (77.8%)
# Gaps: 0/171 ( 0.0%)
# Score: 513.0
#
#
#=======================================
BSNT_03336___ 1 ATGGAAAGTAAAATCGAAATTCTTTCAACAATTAATGTAGAGCATTCTGA 50
|||||||..||||||||||||||.||.||..|.|..||.|||||.||.||
BL02748___ypm 1 ATGGAAAACAAAATCGAAATTCTATCTACTGTAAGCGTCGAGCACTCAGA 50
BSNT_03336___ 51 TGATCTGTATAAAATTGTGGACACATTGAATCGTACACTGAAAAGAGACA 100
.||.|||||||||||.||.||....|||||.|||||.||.|||.|.||..
BL02748___ypm 51 AGACCTGTATAAAATCGTTGATCTTTTGAACCGTACGCTCAAACGCGATG 100
BSNT_03336___ 101 ATCTGATGTTCGGCCTTGCGCTGGATGAAGAAAACAAAAACCAAGCCGTT 150
||||.|||||||||||.||.||.|||||||||.||.||||.||.|||.||
BL02748___ypm 101 ATCTCATGTTCGGCCTCGCTCTCGATGAAGAAGACCAAAAACAGGCCATT 150
BSNT_03336___ 151 TTTACCATTTATCGTACGTAG 171
|||||.|||||||||||.|||
BL02748___ypm 151 TTTACGATTTATCGTACTTAG 171
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