Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03331 and BL02744
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:01
# Commandline: needle
# -asequence pep-align/BSNT_03331___dnaD.1.5803.seq
# -bsequence pep-align/BL02744___dnaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03331___dnaD-BL02744___dnaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03331___dnaD-BL02744___dnaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03331___dnaD
# 2: BL02744___dnaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 169/232 (72.8%)
# Similarity: 196/232 (84.5%)
# Gaps: 0/232 ( 0.0%)
# Score: 913.0
#
#
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BSNT_03331___ 1 MKKQQFIDMQEQGTSTIPNLLLTHYKQLGLNETELILLLKIKMHLEKGSY 50
||||.||.||:.|..||||||..:|::|||||||.:|||.||||:|:||:
BL02744___dna 1 MKKQHFIKMQDMGAVTIPNLLFMNYRELGLNETEFMLLLNIKMHVERGSF 50
BSNT_03331___ 51 FPTPNQLQEGMSISVEECTNRLRMFIQKGFLFIEECEDQNGIKFEKYSLQ 100
||||.:|.:.|||..|||.|.|||||||||::|||||||||||||||||:
BL02744___dna 51 FPTPEELSKTMSIETEECMNMLRMFIQKGFIYIEECEDQNGIKFEKYSLE 100
BSNT_03331___ 101 PLWGKLYEYIQLAQNQTQERKAEGEQKSLYTIFEEEFARPLSPLECETLA 150
||||||:|.:::|:.:....:.|||||||||||||||||||||||||||:
BL02744___dna 101 PLWGKLFELLEMAEQKKLAEQNEGEQKSLYTIFEEEFARPLSPLECETLS 150
BSNT_03331___ 151 IWQDQDQHDAQLIKHALKEAVLSGKLSFRYIDRILFEWKKNGLKTVEQAK 200
||.|||.|||||||.||||||:||||:|||||||||||||||:.|||||.
BL02744___dna 151 IWLDQDHHDAQLIKQALKEAVISGKLNFRYIDRILFEWKKNGVSTVEQAV 200
BSNT_03331___ 201 IHSQKFRRVQAKQNEPQKEYKRQVPFYNWLEQ 232
.:||:|||..|.:...||||.|||||||||||
BL02744___dna 201 NYSQRFRRKTAPRQNEQKEYTRQVPFYNWLEQ 232
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