Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03331 and BL02744
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:01
# Commandline: needle
# -asequence dna-align/BSNT_03331___dnaD.1.5803.seq
# -bsequence dna-align/BL02744___dnaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03331___dnaD-BL02744___dnaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03331___dnaD-BL02744___dnaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03331___dnaD
# 2: BL02744___dnaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 736
# Identity: 534/736 (72.6%)
# Similarity: 534/736 (72.6%)
# Gaps: 74/736 (10.1%)
# Score: 1902.5
#
#
#=======================================
BSNT_03331___ 1 ATGAAAAAACAGCAATTTATTGATATGCAGGAGCAGGGAAC-ATCAACCA 49
||||||||||||||.||||||.|.||||||||...||||.| .|| ||||
BL02744___dna 1 ATGAAAAAACAGCACTTTATTAAGATGCAGGATATGGGAGCTGTC-ACCA 49
BSNT_03331___ 50 TCCCCAATCTTCTGCTTACGCATTATAAAC-------AGCTTGGGCTT-A 91
|.||.|||||.|| |.||||.||| ||||| ||||| |
BL02744___dna 50 TTCCGAATCTGCT-------CTTTATGAACTATCGGGAGCTT-GGCTTAA 91
BSNT_03331___ 92 ATGAAACAGAACTTATTCTGCTGTTAAAAATTAAAATGCATTTAGAAAAA 141
|.||.||||||.|.||.|||||.|||||.||||||||||||.|.||||.|
BL02744___dna 92 ACGAGACAGAATTCATGCTGCTCTTAAACATTAAAATGCATGTTGAAAGA 141
BSNT_03331___ 142 GGATCATATTTTCCTACACC----GAATCAGCTGCAGGAAGGTATGTCAA 187
||.||.|.||||||.||.|| ||||.| .|||.||.| |||||.|
BL02744___dna 142 GGTTCTTTTTTTCCGACGCCGGAGGAATTA--AGCAAGACG--ATGTCGA 187
BSNT_03331___ 188 TT----TCTGTTGAAGAATGCACAAACAGATTGCGGATGTTTATTCAAAA 233
|| .| ||||||||||..||.|...||.|.|||||.||||||||
BL02744___dna 188 TTGAAACC----GAAGAATGCATGAATATGCTGAGAATGTTCATTCAAAA 233
BSNT_03331___ 234 AGGCTTTCTGTTTATTGAAGAATGCGAGGATCAAAACGGCATCAAATTTG 283
||||||..|.|.|||.|||||||||||.||.||.||||||||.|||||||
BL02744___dna 234 AGGCTTCATCTATATAGAAGAATGCGAAGACCAGAACGGCATTAAATTTG 283
BSNT_03331___ 284 AGAAATATTCTCTTCAGCCTTTATGGGGGAAGCTGTACGAATATATTCAG 333
|.||||||||.||..|.|||.|.|||||.||||||| ||.||
BL02744___dna 284 AAAAATATTCGCTCGAACCTCTCTGGGGCAAGCTGT---------TTGAG 324
BSNT_03331___ 334 CTTGCACAGAAT---CAAACACAGGAAA------GAAAAGCA-GAAGGGG 373
|||..|.| ||| |.|.||.|..||| |||.||.| |||||.|
BL02744___dna 325 CTTTTAGA-AATGGCCGAGCAGAAAAAACTCGCCGAACAGAATGAAGGCG 373
BSNT_03331___ 374 AACAAAAAAGCCTTTATACCATTTTTGAGGAAGAGTTCGCAAGGCCGTTA 423
||||.||.|||||||||||.||.|||||.||||||||.|||.|.|||.|.
BL02744___dna 374 AACAGAAGAGCCTTTATACAATCTTTGAAGAAGAGTTTGCACGACCGCTT 423
BSNT_03331___ 424 TCGCCTTTGGAGTGTGAAACGCT-GGCGATCTGGCAGGACCAGGATCAGC 472
||.||..||||.||.||.||||| .|| |||||||..|||||||||||.|
BL02744___dna 424 TCTCCGCTGGAATGCGAGACGCTCAGC-ATCTGGCTTGACCAGGATCATC 472
BSNT_03331___ 473 ATGACGCACAACTGATCAAACACGCGTTAAAAGAGGCTGTACTATCAGGA 522
|.||.|||||.|||||||||||.||..|.|||||.||.||..||||||||
BL02744___dna 473 ACGATGCACAGCTGATCAAACAAGCTCTCAAAGAAGCCGTCATATCAGGA 522
BSNT_03331___ 523 AAACTCAGTTTCCGCTACATTGACCGCATTTTGTTTGAATGGAAGAAAAA 572
|||.|.|.||||||||||||||||||.|||.|||||||.|||||||||||
BL02744___dna 523 AAATTAAATTTCCGCTACATTGACCGGATTCTGTTTGAGTGGAAGAAAAA 572
BSNT_03331___ 573 CGGGCTTAAAACTGTGGAGCAGGC--AAAAATACACAGCCAAAAATTCCG 620
|||..||..|||.||.||.||.|| .|||.| |||||||||.||||.|
BL02744___dna 573 CGGCGTTTCAACAGTCGAACAAGCCGTAAACT--ACAGCCAAAGATTCAG 620
BSNT_03331___ 621 GCGTGTACAAG-------CAAAGCAAAATGAACCGCAAAAAGAGTATAAA 663
||| .||| |...||||||||| ||||||.|||||||.|
BL02744___dna 621 GCG----GAAGACTGCTCCGCGGCAAAATGA---GCAAAAGGAGTATACA 663
BSNT_03331___ 664 AGGCAGGTTCCTTTTTACAATTGGCTTGAACAATAA 699
||.|||||||||||||||||||||||||||||||||
BL02744___dna 664 AGACAGGTTCCTTTTTACAATTGGCTTGAACAATAA 699
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