Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03309 and BL02736

See DNA alignment / Visit BSNT_03309 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_03309___yprA.1.5803.seq
#    -bsequence pep-align/BL02736___yprB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03309___yprA-BL02736___yprB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03309___yprA-BL02736___yprB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03309___yprA
# 2: BL02736___yprB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 756
# Identity:     497/756 (65.7%)
# Similarity:   612/756 (81.0%)
# Gaps:           8/756 ( 1.1%)
# Score: 2666.5
# 
#
#=======================================

BSNT_03309___      1 -MKKKSLTELISDLKGNE----NVVNWHEIEPREAKTRPMPESIDERIKA     45
                      .:|::||::|..||.::    .:|:||.||.:||..|..||.:|:||..
BL02736___ypr      1 MFQKRNLTDMIQLLKEDQAFSRQIVHWHTIEGKEADYRDFPEGLDKRIVH     50

BSNT_03309___     46 ALSKRGIDELYTHQYSAFQYVQKGESIVTVTPTASGKTLCYNLPVLQSIA     95
                     ||.:|||::||:||..||.:...|:::..||||||||||||||||:|.|.
BL02736___ypr     51 ALQQRGIEKLYSHQADAFLHSAAGKNVTLVTPTASGKTLCYNLPVIQRIT    100

BSNT_03309___     96 QDETNRALYLFPTKALAQDQKSELNEIIDEMGIDIKSFTYDGDTSPAIRQ    145
                     :|:..|:|||||||||:|||||||||:|||:|..|..:||||||||:|||
BL02736___ypr    101 EDQDARSLYLFPTKALSQDQKSELNELIDEIGASINCYTYDGDTSPSIRQ    150

BSNT_03309___    146 KVRKAGHIVITNPDMLHSAILPHHTKWVSLFENLKYIVIDELHTYRGVFG    195
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BL02736___ypr    151 KVRKAGHIVITNPDMLHSAILPHHTKWVSLFENLKYIVIDELHVYRGVFG    200

BSNT_03309___    196 SHVANVIRRLKRICRFYGSDPVFICTSATIANPKELGEQLTGKPMRLVDD    245
                     ||||||||||.||..||||.|.|||||||||||.||.|.|||:||.|:.:
BL02736___ypr    201 SHVANVIRRLMRIAEFYGSKPQFICTSATIANPLELAETLTGQPMHLISN    250

BSNT_03309___    246 NGAPSGRKHFVFYNPPIVNKPLNIRRSATAEVNELAKEFLKNKVQTIVFA    295
                     ||||||||||:|||||:||:.||||:|||.||.:||.|||||.:||||||
BL02736___ypr    251 NGAPSGRKHFLFYNPPMVNRSLNIRKSATLEVRKLASEFLKNGIQTIVFA    300

BSNT_03309___    296 RSRVRVEIILSHIQELVKKEIGTKSIRGYRGGYLPKERREIERGLREGDI    345
                     ||||||||||:::||::|..:|..||:||||||||.|||.||:|||.|||
BL02736___ypr    301 RSRVRVEIILTYLQEVMKPIVGPHSIQGYRGGYLPNERRVIEKGLRSGDI    350

BSNT_03309___    346 LGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLII    395
                     .||||||||||||||||||.|:||||||:::|||||||||||||.|:||:
BL02736___ypr    351 KGVVSTNALELGVDIGQLQTCIMTGYPGTISSAWQQAGRAGRRHNEALIV    400

BSNT_03309___    396 LVANSTPIDQYIVRHPEYFFNRSPESARINPENLIILVDHLKCAAYELPF    445
                     :||:|.|:|||||::|:|||.::||:|.|||:||:|||||:||||:||||
BL02736___ypr    401 MVASSAPLDQYIVQNPDYFFKQNPETAVINPDNLVILVDHIKCAAFELPF    450

BSNT_03309___    446 RADEEFGAMEVSDILEYLQEEAVLHRNGERYHWASESFPASNISLRSASQ    495
                     :..:.||.:|:.|||:||.||.|||..|..|||.:::|||..||||||||
BL02736___ypr    451 KRTDTFGGIEIEDILDYLAEERVLHLTGNTYHWMNDAFPAHGISLRSASQ    500

BSNT_03309___    496 ENVVIVDQSDIANVRIIGEMDRFSAMTLLHDEAIYLHEGVQYQVEKLDWD    545
                     |||||:|||.....::|||||||||||||||||||||:|:|||||||||:
BL02736___ypr    501 ENVVIIDQSRREKAKVIGEMDRFSAMTLLHDEAIYLHQGIQYQVEKLDWE    550

BSNT_03309___    546 HKKAYVRKVDVEYYTDANLAVQLKVLEIDKTKEKSRTSLHYGDVTVNALP    595
                     .|||:||:|.|:|||||||||.|:|||:||.|:....:..:|||||.|..
BL02736___ypr    551 EKKAFVREVQVDYYTDANLAVLLRVLEVDKEKKTETAAFGFGDVTVQAKA    600

BSNT_03309___    596 TIFKKIKMTTFENIGSGPIHLPEEELHTSAAWLEIKTAD-EDIGEKTLEQ    644
                     |||||||..|.|||||||||||||||||:|||:::..:: ::..:..||:
BL02736___ypr    601 TIFKKIKFETHENIGSGPIHLPEEELHTNAAWVQVNDSERQNWNDIKLEE    650

BSNT_03309___    645 LLLGISNVLQHIVPVYIMCDRNDVHVVSQIKAAHTGLPTIFLYDHYPGGI    694
                     .|||.:|||.|:..:.:|||.:|:||..||||.|...|||||||.||||:
BL02736___ypr    651 ALLGTANVLGHVAALKVMCDPSDLHVFPQIKAVHNEKPTIFLYDRYPGGV    700

BSNT_03309___    695 GLAEEVFKRFSDINEAAKQLITHCPCHDGCPSCIGTEIEGIKAKERILQL    744
                     ||:::|:::..:|...|.:||:.|||..|||||||.. .|.:.|...|:|
BL02736___ypr    701 GLSQKVYEQMPEIISEAHRLISRCPCESGCPSCIGVS-GGDQTKNNALRL    749

BSNT_03309___    745 LDQMS-    749
                     |.... 
BL02736___ypr    750 LKGWKG    755


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03309 and BL02736

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
