Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00319 and BL02717
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence pep-align/BSNT_00319___ybbE.1.5803.seq
# -bsequence pep-align/BL02717___ybbE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00319___ybbE-BL02717___ybbE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00319___ybbE-BL02717___ybbE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00319___ybbE
# 2: BL02717___ybbE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity: 278/452 (61.5%)
# Similarity: 332/452 (73.5%)
# Gaps: 15/452 ( 3.3%)
# Score: 1478.5
#
#
#=======================================
BSNT_00319___ 1 MKTKTLFIFSAILTLSIFAPNETFAQTA------DNLVEPKTINAET--- 41
.:...:::|.|:.|.|..:.|||| ..|..|....|:|
BL02717___ybb 1 ----MISAAASLLLLTCFFPLPSTAQTAIGNETKQRLTYPVLTKAKTPEE 46
BSNT_00319___ 42 AQFSTKKLKKVDQMIERDIAAGFPGAVLVVVKDGRIIKKEAYGYSKKYEG 91
|.||:||||.||::||:|:.||||||.|:::|||:|||||.|||.:||.|
BL02717___ybb 47 AGFSSKKLKAVDRLIEQDVKAGFPGAALILIKDGKIIKKEVYGYKQKYNG 96
BSNT_00319___ 92 SELLRRPAKMKTRTMFDLASNTKMYATNFVLQRLVSQGKLDVYEKVSAYL 141
...|:.|.|||..|||||||||||||.||.||.|||.||||:.:.:|.||
BL02717___ybb 97 LIALKHPKKMKANTMFDLASNTKMYAVNFALQHLVSTGKLDLNKNISQYL 146
BSNT_00319___ 142 PGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPEKAGKYYSQERD 191
|.|||.|.|.:|||:::||||:|.|.:|.|:|:.:|.|:.||..|||.|.
BL02717___ybb 147 PDFKDHPEDDVKGKNRLRVIDLLHHNAGFPASWNYYDPKSAGHLYSQSRS 196
BSNT_00319___ 192 KTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELY 241
||:|||.|.||.|:.|||.:||||.|||||.|:||:|.:.||.:.|...|
BL02717___ybb 197 KTLEYLVKTPLAYEPGTKQIYSDIDYMLLGLIIEKITNERLDTFVENRFY 246
BSNT_00319___ 242 KPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEV 291
:||.|:|||:||||||||...||||||:||||||.|.||||||.||||||
BL02717___ybb 247 RPLGLRHTLFNPLQKGFKRSHFAATERLGNTRDGTISFPNIRTYTLQGEV 296
BSNT_00319___ 292 HDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTAD 341
|||||||||:||||||||||..||.|:|||||||.|.|....||......
BL02717___ybb 297 HDEKAFYSMEGVSGHAGLFSTVDDAAVLLQVMLNGGGYGRQHLFSSSVIS 346
BSNT_00319___ 342 LFTAPSATDPTFALGWRRNGSKSMEWMFGPHASENAYGHTGWTGTVTIID 391
.||.||.|:||:.||||.||:..||||||.|||..|||||||||||||||
BL02717___ybb 347 QFTEPSKTNPTYGLGWRLNGNTDMEWMFGKHASSKAYGHTGWTGTVTIID 396
BSNT_00319___ 392 PAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFATGSYGSVITAIYEAME 441
|.|.:||.|||||||:|||:|:||||.||||:||||.|||||||:|||:.
BL02717___ybb 397 PVYQIGIVLLTNKKHSPVINPKENPNQFEGDEFATGKYGSVITAVYEALH 446
BSNT_00319___ 441 -- 441
BL02717___ybb 447 HQ 448
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