Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_00319 and BL02717

See DNA alignment / Visit BSNT_00319 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence pep-align/BSNT_00319___ybbE.1.5803.seq
#    -bsequence pep-align/BL02717___ybbE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00319___ybbE-BL02717___ybbE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00319___ybbE-BL02717___ybbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00319___ybbE
# 2: BL02717___ybbE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity:     278/452 (61.5%)
# Similarity:   332/452 (73.5%)
# Gaps:          15/452 ( 3.3%)
# Score: 1478.5
# 
#
#=======================================

BSNT_00319___      1 MKTKTLFIFSAILTLSIFAPNETFAQTA------DNLVEPKTINAET---     41
                         .:...:::|.|:.|.|..:.||||      ..|..|....|:|   
BL02717___ybb      1 ----MISAAASLLLLTCFFPLPSTAQTAIGNETKQRLTYPVLTKAKTPEE     46

BSNT_00319___     42 AQFSTKKLKKVDQMIERDIAAGFPGAVLVVVKDGRIIKKEAYGYSKKYEG     91
                     |.||:||||.||::||:|:.||||||.|:::|||:|||||.|||.:||.|
BL02717___ybb     47 AGFSSKKLKAVDRLIEQDVKAGFPGAALILIKDGKIIKKEVYGYKQKYNG     96

BSNT_00319___     92 SELLRRPAKMKTRTMFDLASNTKMYATNFVLQRLVSQGKLDVYEKVSAYL    141
                     ...|:.|.|||..|||||||||||||.||.||.|||.||||:.:.:|.||
BL02717___ybb     97 LIALKHPKKMKANTMFDLASNTKMYAVNFALQHLVSTGKLDLNKNISQYL    146

BSNT_00319___    142 PGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPEKAGKYYSQERD    191
                     |.|||.|.|.:|||:::||||:|.|.:|.|:|:.:|.|:.||..|||.|.
BL02717___ybb    147 PDFKDHPEDDVKGKNRLRVIDLLHHNAGFPASWNYYDPKSAGHLYSQSRS    196

BSNT_00319___    192 KTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELY    241
                     ||:|||.|.||.|:.|||.:||||.|||||.|:||:|.:.||.:.|...|
BL02717___ybb    197 KTLEYLVKTPLAYEPGTKQIYSDIDYMLLGLIIEKITNERLDTFVENRFY    246

BSNT_00319___    242 KPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEV    291
                     :||.|:|||:||||||||...||||||:||||||.|.||||||.||||||
BL02717___ybb    247 RPLGLRHTLFNPLQKGFKRSHFAATERLGNTRDGTISFPNIRTYTLQGEV    296

BSNT_00319___    292 HDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTAD    341
                     |||||||||:||||||||||..||.|:|||||||.|.|....||......
BL02717___ybb    297 HDEKAFYSMEGVSGHAGLFSTVDDAAVLLQVMLNGGGYGRQHLFSSSVIS    346

BSNT_00319___    342 LFTAPSATDPTFALGWRRNGSKSMEWMFGPHASENAYGHTGWTGTVTIID    391
                     .||.||.|:||:.||||.||:..||||||.|||..|||||||||||||||
BL02717___ybb    347 QFTEPSKTNPTYGLGWRLNGNTDMEWMFGKHASSKAYGHTGWTGTVTIID    396

BSNT_00319___    392 PAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFATGSYGSVITAIYEAME    441
                     |.|.:||.|||||||:|||:|:||||.||||:||||.|||||||:|||:.
BL02717___ybb    397 PVYQIGIVLLTNKKHSPVINPKENPNQFEGDEFATGKYGSVITAVYEALH    446

BSNT_00319___    441 --    441
                       
BL02717___ybb    447 HQ    448


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.