Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00345 and BL02702
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:00
# Commandline: needle
# -asequence pep-align/BSNT_00345___ybbR.1.5803.seq
# -bsequence pep-align/BL02702___ybbR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00345___ybbR-BL02702___ybbR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00345___ybbR-BL02702___ybbR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00345___ybbR
# 2: BL02702___ybbR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 484
# Identity: 293/484 (60.5%)
# Similarity: 375/484 (77.5%)
# Gaps: 46/484 ( 9.5%)
# Score: 1584.0
#
#
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BSNT_00345___ 1 MDKFLNYRWAVKIIALLFALLLYVAVNSNQAPTPKKPGESFFPTSTTDEA 50
||||||..||||::|||||.|||.||:|.|||||||||||||||||||||
BL02702___ybb 1 MDKFLNNPWAVKVVALLFAFLLYFAVHSAQAPTPKKPGESFFPTSTTDEA 50
BSNT_00345___ 51 TLTDIPVKAYYDDENYVVTGVPQTVNVTIKGSTSAVKKARQTKNFEIYAD 100
||||||||::|||||||||||||||||||||.|..|||.||.|:||||||
BL02702___ybb 51 TLTDIPVKSFYDDENYVVTGVPQTVNVTIKGPTGTVKKVRQVKDFEIYAD 100
BSNT_00345___ 101 MEHLKTGTHKVELKAKNVSDGMTISINPSVTTVTIQERTTKSFPVEVEYY 150
|::||||.|||||||:||:||:|::||||||||||:|:|||.|||||::|
BL02702___ybb 101 MQNLKTGRHKVELKARNVADGLTLTINPSVTTVTIEEKTTKEFPVEVDFY 150
BSNT_00345___ 151 NKSKMKKGYSPEQPIVSPKNVQITGSKNVIDNISLVKASVNLENADETIE 200
||:|||.||:||.||::||||.:||||.|||.|..:||::|||..|:|:|
BL02702___ybb 151 NKNKMKDGYTPELPIINPKNVSVTGSKAVIDRIQNIKATINLEGVDQTVE 200
BSNT_00345___ 201 KEAKVTVYDKDGNALPVDVEPSVIKITVPVTSPSKKVPFKIERTGSLPDG 250
||||:||||||||.|||:|.|||:||||||||||||:|.|::|.||||||
BL02702___ybb 201 KEAKLTVYDKDGNVLPVEVSPSVVKITVPVTSPSKKIPVKVDRKGSLPDG 250
BSNT_00345___ 251 VSIANIESSPSEVTVYGSQDVLDSLEFIDGVSLDLSKINKDSDIEADILL 300
:||::::.||.||||||.|:|||||||::...:|||||..|:::||.|.:
BL02702___ybb 251 ISISSLDISPGEVTVYGPQNVLDSLEFVEADEIDLSKIKDDTELEAGIKV 300
BSNT_00345___ 301 PDGVKKISPSKVTLHIEVDSEADQKFENVPIKTVGLSSSQNIEYLDPESQ 350
|||.||:||.||.:.::||.|.::|.:||.|||.||:.|:::|:|||:|.
BL02702___ybb 301 PDGAKKVSPEKVKIKVKVDKEEEKKLKNVSIKTAGLNDSRDLEFLDPKSG 350
BSNT_00345___ 351 AIDVTAKGSPANIKKLKKSDIELYVNVSDLEDGEHSVKLEVNGPQNVTWS 400
.:|:|||||.|.|:||:.||:||||||:||:||||:||||||||||:|||
BL02702___ybb 351 KLDITAKGSTAAIEKLQPSDVELYVNVADLDDGEHNVKLEVNGPQNMTWS 400
BSNT_00345___ 401 LGRKNAKIKLTSKKSNTSTNDNSSNTSGNQDDTDKQTNDQKNNQQEDTKN 450
|.|::.::|::|: |..|..| |..|.:::.:.:|::|..
BL02702___ybb 401 LPRQSIRVKISSQ-----TTQNEKN---NGQDEEEENHSEKDSQPS---- 438
BSNT_00345___ 451 TDKNNNDQNQDENKDQNQDQDEDESTANSQSSSE 484
BL02702___ybb 438 ---------------------------------- 438
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