Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00342 and BL02699
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence pep-align/BSNT_00342___sigW.1.5803.seq
# -bsequence pep-align/BL02699___sigW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00342___sigW-BL02699___sigW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00342___sigW-BL02699___sigW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00342___sigW
# 2: BL02699___sigW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 175/187 (93.6%)
# Similarity: 180/187 (96.3%)
# Gaps: 0/187 ( 0.0%)
# Score: 887.0
#
#
#=======================================
BSNT_00342___ 1 MEMMIKKRIKQVKKGDQNAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQ 50
||.|||||||||||||:||||||||||||||||||||||||.||||||||
BL02699___sig 1 METMIKKRIKQVKKGDRNAFADIVDIYKDKIYQLCYRMLGNAHEAEDIAQ 50
BSNT_00342___ 51 EAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02699___sig 51 EAFIRAYVNIDSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAG 100
BSNT_00342___ 101 TEGLTMYSQIAADGVLPEDAVVSLELSNTIQQKILKLPDKYRTVIVLKYI 150
|||||||||:|||..||||.||||||.:|||:|||:||||||||||||||
BL02699___sig 101 TEGLTMYSQVAADVALPEDEVVSLELHSTIQEKILRLPDKYRTVIVLKYI 150
BSNT_00342___ 151 DELSLIEIGEILNIPVGTVKTRIHRGREALRKQLRDL 187
||||||||.||||||||||||||||||||||||||||
BL02699___sig 151 DELSLIEISEILNIPVGTVKTRIHRGREALRKQLRDL 187
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