Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00342 and BL02699

See Amino acid alignment / Visit BSNT_00342 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence dna-align/BSNT_00342___sigW.1.5803.seq
#    -bsequence dna-align/BL02699___sigW.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00342___sigW-BL02699___sigW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00342___sigW-BL02699___sigW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00342___sigW
# 2: BL02699___sigW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 565
# Identity:     473/565 (83.7%)
# Similarity:   473/565 (83.7%)
# Gaps:           2/565 ( 0.4%)
# Score: 1985.0
# 
#
#=======================================

BSNT_00342___      1 ATGGAAATGATGATTAAAAAAAGAATTAAACAAGTCAAAAAAGGCGACCA     50
                     |||||||..|||||||||||||||||.|||||.||.|||||||||||.|.
BL02699___sig      1 ATGGAAACAATGATTAAAAAAAGAATCAAACAGGTGAAAAAAGGCGATCG     50

BSNT_00342___     51 GAATGCATTTGCGGACATCGTAGATATTTACAAAGATAAAATTTATCAGC    100
                     .||.||||||||.||||||||.||||||||||||||.|||||||||||||
BL02699___sig     51 TAACGCATTTGCAGACATCGTGGATATTTACAAAGACAAAATTTATCAGC    100

BSNT_00342___    101 TTTGCTACCGTATGCTTGGCAATGTGCATGAGGCGGAGGATATTGCACAG    150
                     ||||||||||||||||.|||||||.||||||||||||.||||||||.|||
BL02699___sig    101 TTTGCTACCGTATGCTCGGCAATGCGCATGAGGCGGAAGATATTGCGCAG    150

BSNT_00342___    151 GAAGCTTTCATCAGAGCGTACGTTAATATCGACAGTTTTGATATTAACCG    200
                     |||||.||.||||||||.|||||.||||||||||||||||||||.|||||
BL02699___sig    151 GAAGCGTTTATCAGAGCATACGTGAATATCGACAGTTTTGATATCAACCG    200

BSNT_00342___    201 GAAATTTTCAACTTGGCTTTATCGAATCGCGACCAATTTGACCATTGACC    250
                     |||||||||.||.|||||||||||||||||.||||||||||||||.||.|
BL02699___sig    201 GAAATTTTCCACATGGCTTTATCGAATCGCAACCAATTTGACCATCGATC    250

BSNT_00342___    251 GCATTCGCAAAAAGAAGCCGGATTATTACCTCGATGCAGAGGTGGCTGGT    300
                     |.||.||.|||||.||||||||.||||||.|.||||||||||||||.||.
BL02699___sig    251 GTATCCGTAAAAAAAAGCCGGACTATTACTTGGATGCAGAGGTGGCAGGG    300

BSNT_00342___    301 ACGGAAGGCTTGACCATGTATTCTCAAATCGCCGCAGATGGTGTTTTGCC    350
                     ||.|||||..||||.||||||||.||..|.||.||.||||.||...|.||
BL02699___sig    301 ACTGAAGGACTGACAATGTATTCCCAGGTTGCGGCGGATGTTGCGCTTCC    350

BSNT_00342___    351 TGAAGATGCAGTTGTGTCGCTGGAGCTCTCA-AACACGATACAGCAGAAA    399
                     .||.||||.|||.||.||..||||||| .|| |.|||.||.|||.|.|||
BL02699___sig    351 AGAGGATGAAGTGGTTTCTTTGGAGCT-GCACAGCACCATCCAGGAAAAA    399

BSNT_00342___    400 ATTTTAAAGCTTCCTGACAAATACAGAACAGTCATCGTATTAAAGTATAT    449
                     ||.||||.||||||.||.||||||||.||.|||||||||||||||||.||
BL02699___sig    400 ATCTTAAGGCTTCCCGATAAATACAGGACGGTCATCGTATTAAAGTACAT    449

BSNT_00342___    450 TGACGAACTCTCATTAATTGAAATCGGGGAGATTCTAAACATTCCTGTGG    499
                     |||.||.||.|||.|.|||||.|||.|.||.||.||.||.|||||.||.|
BL02699___sig    450 TGATGAGCTTTCACTCATTGAGATCAGTGAAATCCTCAATATTCCCGTAG    499

BSNT_00342___    500 GGACTGTGAAAACGCGGATTCACAGAGGCAGAGAGGCTCTTAGAAAACAA    549
                     |.||.|||||||||.||||.|||||.||||||||||||||.|||||||||
BL02699___sig    500 GTACGGTGAAAACGAGGATACACAGGGGCAGAGAGGCTCTCAGAAAACAA    549

BSNT_00342___    550 TTAAGGGATCTTTAA    564
                     |||||||||||||||
BL02699___sig    550 TTAAGGGATCTTTAA    564


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