Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04730 and BL02687

See DNA alignment / Visit BSNT_04730 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence pep-align/BSNT_04730___paiA.1.5803.seq
#    -bsequence pep-align/BL02687___paiA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04730___paiA-BL02687___paiA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04730___paiA-BL02687___paiA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04730___paiA
# 2: BL02687___paiA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     135/172 (78.5%)
# Similarity:   153/172 (89.0%)
# Gaps:           0/172 ( 0.0%)
# Score: 720.0
# 
#
#=======================================

BSNT_04730___      1 MSVKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQL     50
                     |:|.:|:|:.|||..||::..||||:|||.|||||||||||:.|||.:||
BL02687___pai      1 MTVNIKRCTLEDLHKLQEIGYETFNETFKHQNSPENMKAYLDKAFNLKQL     50

BSNT_04730___     51 EKELCNMSSQFFFVYFDYEIAGYVKVNIDDAQSEEMGAESLEIERIYIKN    100
                     ||||.|.|||||||||:.|||||:|||.|:||||:||.||||||||||||
BL02687___pai     51 EKELSNSSSQFFFVYFNNEIAGYLKVNTDEAQSEKMGDESLEIERIYIKN    100

BSNT_04730___    101 SFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQT    150
                     :||||||||:|.|||:|||.|.|||.||||||||||||||||||||||||
BL02687___pai    101 NFQKHGLGKYLFNKAVEIAKELNKKKIWLGVWEKNENAIAFYKKMGFVQT    150

BSNT_04730___    151 GAHSFYMGDEEQTDLIMAKTLI    172
                     ||||||||||||||.|||||::
BL02687___pai    151 GAHSFYMGDEEQTDFIMAKTIL    172


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.