Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04730 and BL02687

See Amino acid alignment / Visit BSNT_04730 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence dna-align/BSNT_04730___paiA.1.5803.seq
#    -bsequence dna-align/BL02687___paiA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04730___paiA-BL02687___paiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04730___paiA-BL02687___paiA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04730___paiA
# 2: BL02687___paiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity:     433/522 (83.0%)
# Similarity:   433/522 (83.0%)
# Gaps:           6/522 ( 1.1%)
# Score: 1782.5
# 
#
#=======================================

BSNT_04730___      1 ATGAGTGTAAAAATGAAAAAATGCAGCCGGGAAGATTTACAAACACTTCA     50
                     ||||..|||||.||.||||..||.|.||..|||||.|||||.|..|||||
BL02687___pai      1 ATGACAGTAAATATAAAAAGGTGTACCCTTGAAGACTTACACAAGCTTCA     50

BSNT_04730___     51 --ACAATTGAGTATTGAAACATTCAATGACACTTTTAAAGAACAGAACTC     98
                       | ||||| ||..|||||||||.|||||.||.|||||..|.|||||.||
BL02687___pai     51 GGA-AATTG-GTTATGAAACATTTAATGAGACATTTAAGCATCAGAATTC     98

BSNT_04730___     99 ACCTGAAAATATGAAAGCCTATTTAGA-AAGCGCATTTAACACTGAGCAG    147
                     .||.|||||||||||||||||.||.|| ||| |||||||||....|.||.
BL02687___pai     99 GCCAGAAAATATGAAAGCCTACTTGGACAAG-GCATTTAACTTAAAACAA    147

BSNT_04730___    148 CTGGAAAAAGAGTTATGCAATATGTCTTCGCAATTCTTTTTTGTTTACTT    197
                     .|.||||||||.||||.|||||..|||||||||||||||||||||||.||
BL02687___pai    148 TTAGAAAAAGAATTATCCAATAGCTCTTCGCAATTCTTTTTTGTTTATTT    197

BSNT_04730___    198 TGATTATGAAATCGCTGGATATGTAAAGGTCAATATCGATGATGCTCAGT    247
                     |.|..|.|||||||||||||||.||||||||||.|.||||||.||.||||
BL02687___pai    198 TAACAACGAAATCGCTGGATATTTAAAGGTCAACACCGATGAGGCCCAGT    247

BSNT_04730___    248 CTGAAGAAATGGGTGCTGAATCACTTGAAATCGAGAGAATTTATATAAAG    297
                     |||||.|||||||||.||||||||||||||||||||||||||||||.|||
BL02687___pai    248 CTGAAAAAATGGGTGATGAATCACTTGAAATCGAGAGAATTTATATCAAG    297

BSNT_04730___    298 AACAGCTTTCAAAAACATGGGCTTGGCAAACATCTGTTGAATAAAGCGAT    347
                     ||||.||||||||||||.||.||.||||||.|||||||.||||||||..|
BL02687___pai    298 AACAACTTTCAAAAACACGGCCTGGGCAAATATCTGTTCAATAAAGCTGT    347

BSNT_04730___    348 AGAAATTGCGCTGGAACGTAATAAAAAGAACATTTGGCTAGGTGTGTGGG    397
                     .||||||||...|||||..|||||||||||.||.|||||.||.||.||||
BL02687___pai    348 GGAAATTGCAAAGGAACTGAATAAAAAGAAAATCTGGCTGGGCGTATGGG    397

BSNT_04730___    398 AAAAAAATGAAAATGCCATTGCCTTTTATAAGAAAATGGGGTTTGTTCAG    447
                     |||||||.||||||||.|||||.|||||||||||||||||||||||.||.
BL02687___pai    398 AAAAAAACGAAAATGCGATTGCTTTTTATAAGAAAATGGGGTTTGTACAA    447

BSNT_04730___    448 ACCGGCGCCCACTCTTTTTATATGGGTGATGAAGAACAAACGGATTTAAT    497
                     ||||||||||||||||||||||||||.||||||||.||||||||.||.||
BL02687___pai    448 ACCGGCGCCCACTCTTTTTATATGGGAGATGAAGAGCAAACGGACTTTAT    497

BSNT_04730___    498 CATGGCTAAAACACTCATATAA    519
                     ||||||.||||||.||.|||||
BL02687___pai    498 CATGGCCAAAACAATCCTATAA    519


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