Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04730 and BL02687
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_04730___paiA.1.5803.seq
# -bsequence dna-align/BL02687___paiA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04730___paiA-BL02687___paiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04730___paiA-BL02687___paiA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04730___paiA
# 2: BL02687___paiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity: 433/522 (83.0%)
# Similarity: 433/522 (83.0%)
# Gaps: 6/522 ( 1.1%)
# Score: 1782.5
#
#
#=======================================
BSNT_04730___ 1 ATGAGTGTAAAAATGAAAAAATGCAGCCGGGAAGATTTACAAACACTTCA 50
||||..|||||.||.||||..||.|.||..|||||.|||||.|..|||||
BL02687___pai 1 ATGACAGTAAATATAAAAAGGTGTACCCTTGAAGACTTACACAAGCTTCA 50
BSNT_04730___ 51 --ACAATTGAGTATTGAAACATTCAATGACACTTTTAAAGAACAGAACTC 98
| ||||| ||..|||||||||.|||||.||.|||||..|.|||||.||
BL02687___pai 51 GGA-AATTG-GTTATGAAACATTTAATGAGACATTTAAGCATCAGAATTC 98
BSNT_04730___ 99 ACCTGAAAATATGAAAGCCTATTTAGA-AAGCGCATTTAACACTGAGCAG 147
.||.|||||||||||||||||.||.|| ||| |||||||||....|.||.
BL02687___pai 99 GCCAGAAAATATGAAAGCCTACTTGGACAAG-GCATTTAACTTAAAACAA 147
BSNT_04730___ 148 CTGGAAAAAGAGTTATGCAATATGTCTTCGCAATTCTTTTTTGTTTACTT 197
.|.||||||||.||||.|||||..|||||||||||||||||||||||.||
BL02687___pai 148 TTAGAAAAAGAATTATCCAATAGCTCTTCGCAATTCTTTTTTGTTTATTT 197
BSNT_04730___ 198 TGATTATGAAATCGCTGGATATGTAAAGGTCAATATCGATGATGCTCAGT 247
|.|..|.|||||||||||||||.||||||||||.|.||||||.||.||||
BL02687___pai 198 TAACAACGAAATCGCTGGATATTTAAAGGTCAACACCGATGAGGCCCAGT 247
BSNT_04730___ 248 CTGAAGAAATGGGTGCTGAATCACTTGAAATCGAGAGAATTTATATAAAG 297
|||||.|||||||||.||||||||||||||||||||||||||||||.|||
BL02687___pai 248 CTGAAAAAATGGGTGATGAATCACTTGAAATCGAGAGAATTTATATCAAG 297
BSNT_04730___ 298 AACAGCTTTCAAAAACATGGGCTTGGCAAACATCTGTTGAATAAAGCGAT 347
||||.||||||||||||.||.||.||||||.|||||||.||||||||..|
BL02687___pai 298 AACAACTTTCAAAAACACGGCCTGGGCAAATATCTGTTCAATAAAGCTGT 347
BSNT_04730___ 348 AGAAATTGCGCTGGAACGTAATAAAAAGAACATTTGGCTAGGTGTGTGGG 397
.||||||||...|||||..|||||||||||.||.|||||.||.||.||||
BL02687___pai 348 GGAAATTGCAAAGGAACTGAATAAAAAGAAAATCTGGCTGGGCGTATGGG 397
BSNT_04730___ 398 AAAAAAATGAAAATGCCATTGCCTTTTATAAGAAAATGGGGTTTGTTCAG 447
|||||||.||||||||.|||||.|||||||||||||||||||||||.||.
BL02687___pai 398 AAAAAAACGAAAATGCGATTGCTTTTTATAAGAAAATGGGGTTTGTACAA 447
BSNT_04730___ 448 ACCGGCGCCCACTCTTTTTATATGGGTGATGAAGAACAAACGGATTTAAT 497
||||||||||||||||||||||||||.||||||||.||||||||.||.||
BL02687___pai 448 ACCGGCGCCCACTCTTTTTATATGGGAGATGAAGAGCAAACGGACTTTAT 497
BSNT_04730___ 498 CATGGCTAAAACACTCATATAA 519
||||||.||||||.||.|||||
BL02687___pai 498 CATGGCCAAAACAATCCTATAA 519
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