Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01959 and BL02678
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence pep-align/BSNT_01959___yjbX.1.5803.seq
# -bsequence pep-align/BL02678___cotO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01959___yjbX-BL02678___cotO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01959___yjbX-BL02678___cotO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01959___yjbX
# 2: BL02678___cotO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 94/225 (41.8%)
# Similarity: 124/225 (55.1%)
# Gaps: 66/225 (29.3%)
# Score: 422.5
#
#
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BSNT_01959___ 1 MSNKKRNADKKPLMYIVQPDYAETTRSSMQEIVIKRKADKPAPPKAEEKP 50
||::|.:|::||||||||||| :...::||:|:|||| |.|.|:|.|:.
BL02678___cot 1 MSSRKHDAEQKPLMYIVQPDY-DKAEANMQDILIKRK--KKAKPEASEQK 47
BSNT_01959___ 51 AYHEKEQEEAVAQDVLQEDQKPAAEPVSQQIQEVREPENIKSQEEQKQEP 100
|..:::|:||| :.|:|..||.|...
BL02678___cot 48 ARRKEQQDEAV-----RPDEKDGAEAVFND-------------------- 72
BSNT_01959___ 101 QAVEETVEHEPPKAEKKEEPALEARKPEKEPEAVHSADKAEEKAPPARKV 150
||.:.|| ..:.:
BL02678___cot 73 ----------------------EANRSEK----------------GVKPI 84
BSNT_01959___ 151 KKPMSKMTIHEKIDFLTKLPHNMPRALCLIEANGRTYRGVIVGRRNDSVL 200
|||:|||||.||||||..||.|||:.||||||:|:||||.|||::.|||.
BL02678___cot 85 KKPLSKMTIAEKIDFLASLPGNMPKTLCLIEADGKTYRGTIVGKKGDSVF 134
BSNT_01959___ 201 LRTTGNGAPTELAIDDITSLHPLGF 225
:||:..|||.||.|:.|||||||||
BL02678___cot 135 VRTSSKGAPAELPIESITSLHPLGF 159
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