Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01964 and BL02671

See DNA alignment / Visit BSNT_01964 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence pep-align/BSNT_01964___cotX.1.5803.seq
#    -bsequence pep-align/BL02671___cotX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01964___cotX-BL02671___cotX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01964___cotX-BL02671___cotX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01964___cotX
# 2: BL02671___cotX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 170
# Identity:      88/170 (51.8%)
# Similarity:   115/170 (67.6%)
# Gaps:          10/170 ( 5.9%)
# Score: 421.5
# 
#
#=======================================

BSNT_01964___      1 MESRPYSWVALDNSCTHPGS----GYKREAVCHD-VCS-GGEDANAF--Q     42
                     ||:|||||:|||..|.|||:    .|.::.:|.| .|: |.:..|.|  .
BL02671___cot      1 METRPYSWIALDPECEHPGNDYHPSYPKKKLCDDYTCNCGRKGQNGFIDS     50

BSNT_01964___     43 DFDQLSLNKQTSEEMIIVRDSCDIDVTSTDTQVAASIQAALQTAVITIVN     92
                     |.|||.||||.|:|.||::||||:.|::.|||..||:..|.||..:||:.
BL02671___cot     51 DLDQLHLNKQLSDETIIIKDSCDVQVSTEDTQTLASVMTAAQTLAVTIIL    100

BSNT_01964___     93 LSIADGDLADQVIQDLVQQSVNKQSNRQKLVIENSRNVNVTTTDTDIALS    142
                     ..|.|.|||:.|..||:|.:.|||:|||||||:|||||:|||.|||.|:.
BL02671___cot    101 AIIDDPDLAELVTTDLLQVTANKQTNRQKLVIDNSRNVHVTTEDTDTAII    150

BSNT_01964___    143 IQTLTQTLAATIIA--VGIL    160
                     :.|..||:..||.|  ||:|
BL02671___cot    151 VSTFVQTVVITITALIVGLL    170


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