Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01967 and BL02669

See DNA alignment / Visit BSNT_01967 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence pep-align/BSNT_01967___cotV.1.5803.seq
#    -bsequence pep-align/BL02669___cotV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01967___cotV-BL02669___cotV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01967___cotV-BL02669___cotV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01967___cotV
# 2: BL02669___cotV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      64/128 (50.0%)
# Similarity:    89/128 (69.5%)
# Gaps:           0/128 ( 0.0%)
# Score: 302.0
# 
#
#=======================================

BSNT_01967___      1 MSVQENVDTLYSKMFKELAEEHDNYIEIIDSEKITIHKSDTTFALSLQSA     50
                     ||..|..:.||::.|.||..|:|..||:||||.:|::.::.|.|||||:.
BL02669___cot      1 MSFHEKAEALYAETFDELHREYDQLIEVIDSEHVTVNTANITAALSLQAI     50

BSNT_01967___     51 VSALITVTTQLLISDSDIADIVASDLIARSTAHSRKKVKIKIINCYNITI    100
                     |.:|..::.||.|.|.|.||||:..|:|.....||::|.||:|...|:||
BL02669___cot     51 VISLTILSAQLAIEDEDTADIVSEHLLAVHRLQSRRRVIIKVIGSRNVTI    100

BSNT_01967___    101 TLSATDIMASVQLLTQTLIALITEADIL    128
                     |||:.:|:.|||:||:.|||||||.|||
BL02669___cot    101 TLSSLEILLSVQVLTEVLIALITELDIL    128


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.