Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01967 and BL02669
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:30
# Commandline: needle
# -asequence dna-align/BSNT_01967___cotV.1.5803.seq
# -bsequence dna-align/BL02669___cotV.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01967___cotV-BL02669___cotV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01967___cotV-BL02669___cotV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01967___cotV
# 2: BL02669___cotV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 434
# Identity: 245/434 (56.5%)
# Similarity: 245/434 (56.5%)
# Gaps: 94/434 (21.7%)
# Score: 579.5
#
#
#=======================================
BSNT_01967___ 1 ATGTCTGTCCAAGAAAATGTTGACACACTCTACTCAAAAATGTTTAAAGA 50
|||||..|.||.|||||.|..||..|.||.|||.||.|||..|||.|.||
BL02669___cot 1 ATGTCGTTTCATGAAAAAGCCGAAGCGCTGTACGCAGAAACATTTGACGA 50
BSNT_01967___ 51 -----ACTGGCTGAAGAACATGA-----TAATTATATAGAAATTATTGAT 90
||.|| |||.|||| |.||| |||.|.||||||
BL02669___cot 51 ATTACACCGG-----GAATATGACCAGCTCATT-----GAAGTAATTGAT 90
BSNT_01967___ 91 TCTGAAAAGATTACGATTCATAAA----TCAGACACCACATTTGCACTTT 136
||.|||.|..|.||| .|||| .||.|||..|||...||.||.|
BL02669___cot 91 TCAGAACATGTCACG----GTAAACACGGCAAACATAACAGCAGCTCTCT 136
BSNT_01967___ 137 CATTGCAATCAGCAGTTTCAGCTTTAATCACTGTTACAA---------CC 177
|.||.|||.| ||.| .|.|||.||.|.||.| |.
BL02669___cot 137 CTTTACAAGC--------CATC-GTGATCTCTTTGACGATTTTATCGGCT 177
BSNT_01967___ 178 CAGCTTCTTATCAGCGAT--------AGCGATATAGCAGACATTGTTGCG 219
|||||| ||||| || ||||.|||||||||||
BL02669___cot 178 CAGCTT-------GCGATCGAAGACGAG-GATACAGCAGACATTG----- 214
BSNT_01967___ 220 AGTGATCTGATAGCAC------GCTCTACAGCA-----CATAGCCGAAAG 258
|||.|.|.||| ||..|||| || ||.|||.| .||
BL02669___cot 215 -----TCTCAGAACACCTTTTAGCCGTACA-CAGGCTGCAAAGCAG-GAG 257
BSNT_01967___ 259 AA-AGTAAAAATCAAAATTATAAACTGCTATAATATCACAATCAC---TT 304
|| |||.|..||||||.|.||...|.||...|||.||||.||.|| ||
BL02669___cot 258 AAGAGTCATCATCAAAGTCATCGGCAGCCGCAATGTCACCATTACGCTTT 307
BSNT_01967___ 305 TATCAGCTACAGACATCATGGCATCCGTTCAGCTCTTAACCCAAACATTA 354
..|| ||| .||.|||.||...|||||.||..|.||||||.||....|.
BL02669___cot 308 CCTC-GCT--GGAGATCCTGCTTTCCGTCCAAGTTTTAACCGAAGTGCTG 354
BSNT_01967___ 355 ATCGCTCTTATAACAGAAGC-TGACATTCTGTAG 387
|||||.|||||.|||| ||| ||||||.||.||.
BL02669___cot 355 ATCGCGCTTATCACAG-AGCTTGACATACTTTAA 387
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