Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03010 and BL02664

See DNA alignment / Visit BSNT_03010 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence pep-align/BSNT_03010___yngB.1.5803.seq
#    -bsequence pep-align/BL02664___yngB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03010___yngB-BL02664___yngB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03010___yngB-BL02664___yngB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03010___yngB
# 2: BL02664___yngB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     223/298 (74.8%)
# Similarity:   257/298 (86.2%)
# Gaps:           3/298 ( 1.0%)
# Score: 1135.0
# 
#
#=======================================

BSNT_03010___      1 MRKKVRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAAESG     50
                       .||:||||||||||||||||||||||||||||||||||||||||.:||
BL02664___yng      1 --MKVKKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAVQSG     48

BSNT_03010___     51 IEDILIITGRNKRSIEDHFDRSAELEFNLREKGKTETLKEMQQIADLANI    100
                     ||||||||||||||||||||||.|||.||..|||.:.|||:::|||:|||
BL02664___yng     49 IEDILIITGRNKRSIEDHFDRSVELEQNLLAKGKNDVLKEIREIADMANI     98

BSNT_03010___    101 HYIRQKEPLGLGHAVLCAEHFIGDEPFAVLLGDDIMVSETPALRQLMDVY    150
                     ||||||||:|||||||.|:|||||||||||||||||||||||||||::||
BL02664___yng     99 HYIRQKEPIGLGHAVLSAKHFIGDEPFAVLLGDDIMVSETPALRQLLEVY    148

BSNT_03010___    151 DVYGTEVVGVQSVLPEDVSKYGIINTSGSQGHVYEVNDLVEKPSPEEAPS    200
                     :.|.|||:|||.|.|.||||||||.||..:..||:::||||||:.::|||
BL02664___yng    149 EEYQTEVIGVQPVDPADVSKYGIIQTSAQKNKVYQIDDLVEKPTVKDAPS    198

BSNT_03010___    201 EIAVMGRYVLNSSIFSVLKTIGRGAGNEIQLTDALREVCRKEPIHARLLE    250
                     .|||||||||..|||.||:...|||||||||||||||:||::.::||.|:
BL02664___yng    199 NIAVMGRYVLRPSIFPVLEQTKRGAGNEIQLTDALREICREQSMYARKLK    248

BSNT_03010___    251 GNRYDIGDKLGCFKASTEIGLMRSEMRSQLLAYLEDVIKRETKEMLR-    297
                     |:|:|||||||.|||||||.|||.|||.:||||||.|:|:|.::... 
BL02664___yng    249 GSRFDIGDKLGSFKASTEIALMRDEMRPKLLAYLESVLKKEAQKGAWQ    296


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