Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01986 and BL02654
See
DNA alignment /
Visit
BSNT_01986 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence pep-align/BSNT_01986___yjcL.1.5803.seq
# -bsequence pep-align/BL02654___yjcL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01986___yjcL-BL02654___yjcL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01986___yjcL-BL02654___yjcL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01986___yjcL
# 2: BL02654___yjcL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 288/404 (71.3%)
# Similarity: 332/404 (82.2%)
# Gaps: 16/404 ( 4.0%)
# Score: 1474.0
#
#
#=======================================
BSNT_01986___ 1 -MHSLISSDDAWVLWGFIAVWAAVSIGLEQRFKWASAVSGAIIALAGAMV 49
..||||.||.|||||||||||||||.|||||:||:|||||::||.|:|:
BL02654___yjc 1 MNSSLISPDDVWVLWGFIAVWAAVSIYLEQRFRWAAAVSGAVLALGGSML 50
BSNT_01986___ 50 FTNVGVLPVESPVYDTVWSYVVPLAIPLLLFQINVRQIFKESRRLLFIFL 99
|||.|:||.|||.||.||||||||||||||||||||:|.|||.|||.:|.
BL02654___yjc 51 FTNAGILPAESPFYDAVWSYVVPLAIPLLLFQINVRKILKESGRLLMMFC 100
BSNT_01986___ 100 ISSAGTVLGSILAFFLLKQHIPYLDKIGGMISASYIGGGVNFAAMAAKFE 149
||:.||..||::||||.|..||:||||||||||||||||||||||||||.
BL02654___yjc 101 ISALGTAAGSVIAFFLFKDQIPHLDKIGGMISASYIGGGVNFAAMAAKFS 150
BSNT_01986___ 150 TPGEYVSATVVADNFMMALLFFILISIPALKWFQRHYAMPFEEKVKADEN 199
|||||||:||||||||||.|||||:.||||.|||:.:.: .|.
BL02654___yjc 151 TPGEYVSSTVVADNFMMAFLFFILMGIPALTWFQKRFGV--------QEV 192
BSNT_01986___ 200 SG---NSAESYWKRKDISLKDIAFNAGAAFALVAVSMKVSGYFKSIFS-- 244
:| |.||:|||||||||:|||.|.|.|||:||||:|.:.:||..||
BL02654___yjc 193 AGGRENQAEAYWKRKDISLQDIALNIGTAFAIVAVSVKAAAFFKERFSSD 242
BSNT_01986___ 245 --HPLLTGTLGDQYLVLTSLTVLIIFLFPRFFERLNGSQELGTFLIYLFF 292
...|...||||:|:||:||:|:..:|||:||||.||||:||:||||||
BL02654___yjc 243 GGFQFLAFILGDQFLLLTTLTILLTVVFPRYFERLRGSQEIGTYLIYLFF 292
BSNT_01986___ 293 VVIGIPADLRLIVTNAPLILLFVFIIAISNLAVSLAAGKLFRVRLEEILL 342
||||||||||:|:.||||:|.|||:||:|||.|||..|||||.||:||||
BL02654___yjc 293 VVIGIPADLRIILMNAPLLLAFVFVIAMSNLLVSLFCGKLFRFRLDEILL 342
BSNT_01986___ 343 AVNATVGGPTTAAAMAIAKGWRDLVAPIMLVGTLGYLIGNYVGTFMGNWF 392
|.||:|||||||||||||||||.||||:|||||.|||||||||||:|.||
BL02654___yjc 343 ACNASVGGPTTAAAMAIAKGWRGLVAPVMLVGTFGYLIGNYVGTFLGTWF 392
BSNT_01986___ 393 SSFL 396
|:.|
BL02654___yjc 393 STLL 396
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.