Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02223 and BL02651

See DNA alignment / Visit BSNT_02223 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_02223___ykoC.1.5803.seq
#    -bsequence pep-align/BL02651___ykoC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02223___ykoC-BL02651___ykoC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02223___ykoC-BL02651___ykoC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02223___ykoC
# 2: BL02651___ykoC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:      94/264 (35.6%)
# Similarity:   145/264 (54.9%)
# Gaps:          30/264 (11.4%)
# Score: 394.0
# 
#
#=======================================

BSNT_02223___      1 MKQPLHLINATVKAAAVF-----CCVVMLSFIYNPYTPACFYIIIIAGVL     45
                     ||....|::|...:|.:|     .|::|  |:.||  ...|:|.:.|.|:
BL02651___yko      1 MKSNGSLLSALNPSAKLFSHLLVMCILM--FVSNP--KPTFFIWLFAVVI     46

BSNT_02223___     46 LAAGIPLKKWLLF-----TIPFLILAFGCVWTAAVFGKVPTTPDNFLFQA     90
                        ||....|.|.     .:|:||......|..|.|||...|    :::.
BL02651___yko     47 ---GIFFGGWTLSYLSKRLLPYLIFFILVFWMMAAFGKGEET----IWEW     89

BSNT_02223___     91 GPISINSDNVSVGISLGFRILCFSALSMMFVFTTDPILFMLSLVQQCRLS    140
                     ....:..::|..|:::..|:|.|....::|..|||...|::||:.|||||
BL02651___yko     90 AWFRVTEESVGNGLTIALRMLGFVTYGLLFTSTTDLTQFIMSLIHQCRLS    139

BSNT_02223___    141 PKLAYGVIAGFRFLPLLKDEVQLIQQAHKIRGGAAESGIINKIGALKRYT    190
                     ||.|||::|||||:||.:.|:..::.||||||...:    |...|..||.
BL02651___yko    140 PKWAYGLLAGFRFVPLFQSELSQMKAAHKIRGYKQK----NSWKAFIRYA    185

BSNT_02223___    191 IPLLVSAIRKAERTALAMESKGFTGSRNRTYYRTLSVNRRDWVFFCLVLL    240
                     :||....|||:||.|:|||::||||:::||||:|..::.:|:|:|..:..
BL02651___yko    186 LPLFSQGIRKSERIAVAMEARGFTGTKDRTYYQTAGLSGKDFVYFAGLAS    235

BSNT_02223___    241 LFAGSFLVSLCFAS    254
                     :.||..|..     
BL02651___yko    236 VAAGILLTF-----    244


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