Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02224 and BL02650

See DNA alignment / Visit BSNT_02224 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_02224.1.5803.seq
#    -bsequence pep-align/BL02650___ykoD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02224-BL02650___ykoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02224-BL02650___ykoD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02224
# 2: BL02650___ykoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     207/558 (37.1%)
# Similarity:   322/558 (57.7%)
# Gaps:          39/558 ( 7.0%)
# Score: 961.5
# 
#
#=======================================

BSNT_02224         1 MQAFDELLKVDELSFSYEEDEKPVFQDISFELQKGECVLLLGPSGCGKSS     50
                     |::|   |....||..:....:.|...:|..:::||.||:|||||.|||:
BL02650___yko      1 MRSF---LGCSNLSVRFYHRPETVLDRVSLSIEQGEKVLILGPSGSGKST     47

BSNT_02224        51 LALCLNGLYPEACDGIQSGHVFLFQKPVTDAETSQTIAQHAGVVFQDPDQ    100
                     |...|:|:.||..:...:|.|              ...:.|||:|||||.
BL02650___yko     48 LLSVLSGIIPEHIEAEVTGEV--------------NRRKSAGVMFQDPDS     83

BSNT_02224       101 QFCMLTVEDEIAFGLENLQIPKEEMTEKINTVLEKLRITHLKEKTISTLS    150
                     |||||.|::||||.|||..:|.::|...|:.::|.:.:...|:..|.|||
BL02650___yko     84 QFCMLHVDEEIAFSLENRSVPPKDMDRIISELMELVGLKIDKKTPIETLS    133

BSNT_02224       151 GGQKQKVALACILAMEPELIILDEPTSLLDPFSAREFVHLMKDLQREKGF    200
                     ||.||::||||:||:|||::..||||:.|||.|.::...|::|:.|:.|.
BL02650___yko    134 GGMKQRLALACLLALEPEVLFFDEPTAQLDPASRQDIFALLRDVSRKSGQ    183

BSNT_02224       201 SLLVIEHQLDEWAPWIERTIVLDKSGKKALDGLTKNLFQHEAETLKKLGI    250
                     :::.:||.||....|::|.|:.::.|:...||..:.:.:|....:|..||
BL02650___yko    184 TMVFVEHVLDGCIEWMDRVILFNEKGQIIADGKPEEIVKHFQPEMKAAGI    233

BSNT_02224       251 TIPKV-------CHLQEKLSMPFTLSKKMLFKEPIPPGHAKKKEAPSGES    293
                     ..||:       ...|:...:...||..:..||.    .||.:.:...:.
BL02650___yko    234 WQPKLYPAVWEDVTTQDDHPLAVKLSSTLKMKEE----EAKNRPSADRDI    279

BSNT_02224       294 VLEVSSLSFARGQQTIFKDISFSLRGGSLTALVGPNGTGKSTLLSVLARL    343
                     ::.....:....::.:...|:..:..|...:::|.||:||||.|..|.||
BL02650___yko    280 LIRTEDAAIGYRKKIVADGINLEIPRGEWISVIGGNGSGKSTFLKSLIRL    329

BSNT_02224       344 MKPQSGKILLYDQPLQKYKEKELRKRMGFVFQNPEHQFVTDTVYDELLFG    393
                     ...:.|:|.|..:.|:|:.::.|.::.||||||||.||:.|||:||:.||
BL02650___yko    330 EAVKKGRIYLEGRELKKWSDRTLYEKAGFVFQNPELQFIRDTVFDEIAFG    379

BSNT_02224       394 QKANA----ETEKKAQHLLQRFGLAHLADHHPFAISQGQKRRLSVATMLM    439
                     .:..:    :.|:|...|||.|||......|||.:|.||||||||||||:
BL02650___yko    380 ARQRSWPEEQVERKTAELLQEFGLDGHQKAHPFTLSLGQKRRLSVATMLL    429

BSNT_02224       440 HDVKVLLLDEPTFGQDARTAAECMEMIQRIKAEGTAVLMITHDMELVSSY    489
                     .|..:|||||||||||.:||.|.::.::..:..||.::|:||||::|..:
BL02650___yko    430 FDQDLLLLDEPTFGQDEKTAKELIKRLKERQERGTTIVMVTHDMDIVDEH    479

BSNT_02224       490 ADSVLVLHDTGLAFDGSPAQLFSQETGLVQKAKLTLPLLYKWMAYQEEVR    539
                     :|.|:|.|....|:.|:|.||||.: .||::..|..||.|::|   .|.:
BL02650___yko    480 SDRVIVFHQGKAAYQGTPYQLFSDQ-DLVRRFSLIPPLHYRFM---HERK    525

BSNT_02224       540 DEAAVTSH    547
                     :...|   
BL02650___yko    526 ERVPV---    530


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02224 and BL02650

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
