Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02226 and BL02648
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence pep-align/BSNT_02226___ykoE.1.5803.seq
# -bsequence pep-align/BL02648___ykoE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02226___ykoE-BL02648___ykoE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02226___ykoE-BL02648___ykoE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02226___ykoE
# 2: BL02648___ykoE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 80/203 (39.4%)
# Similarity: 124/203 (61.1%)
# Gaps: 8/203 ( 3.9%)
# Score: 377.0
#
#
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BSNT_02226___ 1 MKSWKVKEIVIMSVISIVFAVVYLLFTHFGNVLAGMFGPIAYEPIYGIWF 50
.:|.:||:|:..::|:...|:||.::.....::.:.||:....::|||.
BL02648___yko 1 -MNWNMKEVVMTVILSVACGVIYLGWSTLWIPVSAIVGPVGANFMFGIWV 49
BSNT_02226___ 51 IVSVIAAYMIRKPGAALVSEIIAALVECLLGNPSGPMVIVIGIVQGLGAE 100
|.|.|.||:||||||||::|..||.||.|.|:..|...::||:.||.|||
BL02648___yko 50 IASPIVAYIIRKPGAALIAETAAAAVELLTGSHFGLSALLIGVFQGAGAE 99
BSNT_02226___ 101 AVFLATRWKAYSLPVLMLAGMGSSVASFIYDLFVSGYAAYSPGYLLIMLV 150
..|...|:|.|:|..|||:|..::|.|..|.|..:|:|.|:...|::.|:
BL02648___yko 100 IAFAIFRYKRYNLFTLMLSGALAAVGSATYSLMANGFAYYTTQTLILTLI 149
BSNT_02226___ 151 IRLISGALLAGLLGKAVSDSLAYTGVLNGMALGKELKKKRKRASEHASL- 199
|::|||.:|.|.|.|||.::||.|||||...: :|:.||:....|.:
BL02648___yko 150 IQIISGIVLGGWLAKAVVEALAKTGVLNQYEI---MKEHRKKDDADAFIS 196
BSNT_02226___ 199 --- 199
BL02648___yko 197 RMQ 199
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