Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02921 and BL02642

See DNA alignment / Visit BSNT_02921 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence pep-align/BSNT_02921___thyA.1.5803.seq
#    -bsequence pep-align/BL02642___thyA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02921___thyA-BL02642___thyA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02921___thyA-BL02642___thyA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02921___thyA
# 2: BL02642___thyA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     237/279 (84.9%)
# Similarity:   264/279 (94.6%)
# Gaps:           0/279 ( 0.0%)
# Score: 1322.0
# 
#
#=======================================

BSNT_02921___      1 MTQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRF     50
                     |:.:|:|||:||:.||.:||||||:.||||||||||||||||:||::|||
BL02642___thy      1 MSHYDQQYNAIIQKIIESGISDEEYQVRTKWDSDGTPAHTLSIMSEKMRF     50

BSNT_02921___     51 DNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQE    100
                     |||||||||||||||||||||||||||||||||..||.|||||||||:.|
BL02642___thy     51 DNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVQVLNDMGVHIWDQWRLE    100

BSNT_02921___    101 DGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNP    150
                     |||||.|||:|||||||::||:|||||||||||||:|||||||:||||||
BL02642___thy    101 DGTIGAAYGYQLGKKNRTVNGQKVDQVDYLLHQLKHNPSSRRHLTMLWNP    150

BSNT_02921___    151 DDLDAMSLTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQ    200
                     ||||.|:|||||||||||||.|||.|||||||||||||||||||||||||
BL02642___thy    151 DDLDGMALTPCVYETQWYVKEGKLSLEVRARSNDMALGNPFNVFQYNVLQ    200

BSNT_02921___    201 RMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPE    250
                     ||||||.|||||||||||||||:||||||||.|||:|||:|||:|||||:
BL02642___thy    201 RMIAQVLGYELGEYIFNIGDCHIYTRHIDNLNIQMKREQYEAPKLWINPD    250

BSNT_02921___    251 VKDFYNFTIDDFKLINYKHGDKLLFEVAV    279
                     :|:||:|||||||||:|||||||.|||||
BL02642___thy    251 IKNFYDFTIDDFKLIDYKHGDKLTFEVAV    279


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