Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02921 and BL02642
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:37
# Commandline: needle
# -asequence dna-align/BSNT_02921___thyA.1.5803.seq
# -bsequence dna-align/BL02642___thyA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02921___thyA-BL02642___thyA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02921___thyA-BL02642___thyA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02921___thyA
# 2: BL02642___thyA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 846
# Identity: 646/846 (76.4%)
# Similarity: 646/846 (76.4%)
# Gaps: 12/846 ( 1.4%)
# Score: 2377.0
#
#
#=======================================
BSNT_02921___ 1 ATGACGCAATT-CGATAAACAATACAATTCAATTATAAAGGATATTA-TC 48
|||| ||.||| .||..|.|||||||||.||||.|||.|..|.|||| |.
BL02642___thy 1 ATGA-GCCATTATGACCAGCAATACAATGCAATCATACAAAAAATTATTG 49
BSNT_02921___ 49 AATAATGGAATCTCAGACGAAGAGTTTGATGTAAGAACCAAGTGGGACTC 98
|||.| ||.|||||.||.|||||.|.|.|.||..|.||.||||||||.||
BL02642___thy 50 AATCA-GGGATCTCCGATGAAGAATATCAGGTTCGGACGAAGTGGGATTC 98
BSNT_02921___ 99 AGATGGAACACCGGCACATACTCTAAGTGTAATGAGTAAGCAAATGAGAT 148
|||.|||||.|||||.|||||.||.||..|.|||||..|..|||||.|.|
BL02642___thy 99 AGACGGAACGCCGGCTCATACGCTGAGCATCATGAGCGAAAAAATGCGGT 148
BSNT_02921___ 149 TCGACAACTCAGAGGTTCCGATTTTAACGACAAAAAAGGTTGCCTGGAAA 198
|.|||||.|||||.||.||||||||.|||||.||.|||||.||.||||||
BL02642___thy 149 TTGACAATTCAGAAGTGCCGATTTTGACGACGAAGAAGGTGGCGTGGAAA 198
BSNT_02921___ 199 ACAGCCATTAAAGAGTTGCTCTGGATTTGGCAGCTGAAATCTAATGATGT 248
||.||||||||||||.||||.||||||||||||||||||||.||||||||
BL02642___thy 199 ACGGCCATTAAAGAGCTGCTTTGGATTTGGCAGCTGAAATCCAATGATGT 248
BSNT_02921___ 249 TAATGATTTAAACAAGATGGGCGTACATATTTGGGATCAGTGGAAACAAG 298
|.|.|.|.|.||..|.|||||.||.||||||||||||||.|||...|..|
BL02642___thy 249 TCAAGTTCTGAATGATATGGGGGTTCATATTTGGGATCAATGGCGTCTTG 298
BSNT_02921___ 299 AAGACGGCACCATCGGA-CATGCATATGGATTTCAGCTGGGGAAGAAAAA 347
||||||||||.|||||| || ||.||.||.|.|||..|.|||||||||||
BL02642___thy 299 AAGACGGCACAATCGGAGCA-GCGTACGGCTATCAATTAGGGAAGAAAAA 347
BSNT_02921___ 348 CAGAAGTCTAAACGGAGAAAAAGTGGATCAGGTAGACTATCTTCTTCATC 397
|||||...|.|||||..|.|||||.|||||.||.||.|||.|.|||||||
BL02642___thy 348 CAGAACGGTTAACGGCCAGAAAGTCGATCAAGTGGATTATTTGCTTCATC 397
BSNT_02921___ 398 AATTGAAGAACAACCCGTCTTCACGCAGACATATTACAATGCTGTGGAAT 447
|.||.|||.|.|||||.|||||||||||.|||.|.||.||||||||||||
BL02642___thy 398 AGTTAAAGCATAACCCTTCTTCACGCAGGCATTTGACCATGCTGTGGAAT 447
BSNT_02921___ 448 CCTGATGATTTAGACGCAATGTCCTTAACGCCATGTGTATACGAGACACA 497
||.||||||||.||.|..|||.|.||.||.||.||.||.||.|||||.||
BL02642___thy 448 CCCGATGATTTGGATGGCATGGCTTTGACACCCTGCGTCTATGAGACGCA 497
BSNT_02921___ 498 ATGGTACGTTAAACATGGGAAACTCCACCTT--GAGGTAAGAGCACGGAG 545
||||||.||.|||.|.||.||.||| .||| ||.||||||||..|.||
BL02642___thy 498 ATGGTATGTGAAAGAAGGAAAGCTC--TCTTTAGAAGTAAGAGCGAGAAG 545
BSNT_02921___ 546 CAATGATATGGCATTAGGAAATCCCTTCAATGTATTCCAGTACAATGTGT 595
|||.||.|||||..|.||.||.||.||||||||.||.||.||.|||||.|
BL02642___thy 546 CAACGACATGGCGCTTGGCAACCCGTTCAATGTGTTTCAATATAATGTCT 595
BSNT_02921___ 596 TGCAGCGCATGATTGCTCAAGTGACT-GGTTATGAGCTTGGTGAATATAT 644
|||||||||||||.||.||||| .|| |||||||||||.||.|||||.||
BL02642___thy 596 TGCAGCGCATGATCGCGCAAGT-CCTCGGTTATGAGCTGGGCGAATACAT 644
BSNT_02921___ 645 CTTTAACATTGGGGATTGCCATGTGTACACACGTCATATAGACAATTTGA 694
|||.|||||.||.||.|||||..|.||.||.|||||.||.||||||||.|
BL02642___thy 645 CTTCAACATCGGTGACTGCCACATCTATACCCGTCACATCGACAATTTAA 694
BSNT_02921___ 695 AAATTCAAATGGAAAGAGAACAGTTTGAAGCACCTGAACTATGGATCAAT 744
|.|||||.|||.||.|.||.||||.||||||.||..|.|||||||||||.
BL02642___thy 695 ACATTCAGATGAAACGCGAGCAGTATGAAGCGCCAAAGCTATGGATCAAC 744
BSNT_02921___ 745 CCTGAAGTGAAAGATTTTTATAACTTTACCATTGATGATTTCAAGTTAAT 794
||.||..|.|||.||||||||.|||||||.||.||||||||.||.|||||
BL02642___thy 745 CCGGATATCAAAAATTTTTATGACTTTACAATCGATGATTTTAAATTAAT 794
BSNT_02921___ 795 CAACTATAAACATGGGGACAAGCTTTTATTTGAGGTAGCGGTTTAA 840
|.|||||||.||.||.||||||||...||||||.||.||.||.|.|
BL02642___thy 795 CGACTATAAGCACGGCGACAAGCTGACATTTGAAGTTGCCGTATGA 840
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