Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05502 and BL02637
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence pep-align/BSNT_05502___ywrF.1.5803.seq
# -bsequence pep-align/BL02637___ywrF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05502___ywrF-BL02637___ywrF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05502___ywrF-BL02637___ywrF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05502___ywrF
# 2: BL02637___ywrF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 103/207 (49.8%)
# Similarity: 141/207 (68.1%)
# Gaps: 7/207 ( 3.4%)
# Score: 505.0
#
#
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BSNT_05502___ 1 MYIFQADQL--SAKDTYKLLSGTVIPRPIAFVTTLSSEGAVNAAPFSFYN 48
:...|.| :.::.||.|.|::||||:||||:||.||.:|.||||::|
BL02637___ywr 1 --MLSIDPLTKTERENYKFLIGSIIPRPVAFVTSLSEEGVLNGAPFSYFN 48
BSNT_05502___ 49 VVSSDPPLLSISVNRTEGRQKDTARNAVENGEFVVHVSDEAIIEDINETA 98
:|||:||::|:|:.|:||.|||||||.:::.|||||:.||..:|.:|.||
BL02637___ywr 49 IVSSNPPMISLSIQRSEGSQKDTARNILKSKEFVVHIVDEQNVEKVNATA 98
BSNT_05502___ 99 ASLRPDESELTRTSLHPVESKAVSVPGIKEARVRFECKLERHITFDNDQG 148
|||.|.:||:....|.||||..|||||:|||:||.||.||..:.. .|:.
BL02637___ywr 99 ASLPPSQSEIQLAELTPVESVKVSVPGVKEAKVRMECVLEYSLEL-GDKH 147
BSNT_05502___ 149 ITTADLLIGRVVCFHLDEKVYDAEKGYILTDELKPASRLAGNHYAKLGEE 198
....|.:||:||.:|::..:| |.|.|....|...|||||:.|||:||.
BL02637___ywr 148 SPGCDFMIGQVVQYHIESGIY--ENGKIDPRGLGAISRLAGHDYAKIGEI 195
BSNT_05502___ 199 FTLIRPS 205
||..||.
BL02637___ywr 196 FTRERPK 202
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