Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04686 and BL02618

See DNA alignment / Visit BSNT_04686 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:50
# Commandline: needle
#    -asequence pep-align/BSNT_04686___yueC.1.5803.seq
#    -bsequence pep-align/BL02618___yueC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04686___yueC-BL02618___yueC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04686___yueC-BL02618___yueC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04686___yueC
# 2: BL02618___yueC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity:      69/162 (42.6%)
# Similarity:   102/162 (63.0%)
# Gaps:          18/162 (11.1%)
# Score: 301.0
# 
#
#=======================================

BSNT_04686___      1 MEKGIMICMLSFSLFIPSAAAAQTEENTDVAPNQYEKKDIEIDTNYL-HE     49
                             ||||.||.|.|.|.:|:: .||.||:|||:||:|:|:|| .|
BL02618___yue      1 --------MLSFFLFTPIAKAEETDK-VDVKPNEYEKQDIKIETDYLQEE     41

BSNT_04686___     50 DTYYEEKTELPEEQKDITFDKPKDKDA-ELIKDLFTS-TNAEDSNTIAAQ     97
                     :..|:|:..:|||.|:.:|...|.:|| |.:|.|..| ||  :||::|::
BL02618___yue     42 EAEYKEEISIPEELKEFSFTDSKKEDAIEKLKSLSGSFTN--ESNSVASK     89

BSNT_04686___     98 SKQLGITFAEKPMTKTSSTETEDEQETSSLLLPMIYVVLILLGIAGIVFL    147
                     .|||.::|:..|  ..|..|.:..:...|:.||::|.:||||.|||:.||
BL02618___yue     90 LKQLDLSFSANP--SLSGREDDSAENRQSIFLPILYGLLILLCIAGLFFL    137

BSNT_04686___    148 IPKVTAQENKKA    159
                     ||||:.|:.|  
BL02618___yue    138 IPKVSGQQKK--    147


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