Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04685 and BL02617

See DNA alignment / Visit BSNT_04685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:50
# Commandline: needle
#    -asequence pep-align/BSNT_04685___yueD.1.5803.seq
#    -bsequence pep-align/BL02617___yueD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04685___yueD-BL02617___yueD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04685___yueD-BL02617___yueD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04685___yueD
# 2: BL02617___yueD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     165/243 (67.9%)
# Similarity:   190/243 (78.2%)
# Gaps:           0/243 ( 0.0%)
# Score: 845.0
# 
#
#=======================================

BSNT_04685___      1 MELYIITGASKGLGQAIALQALEKGHEVHALSRTKTDVSHKKLTQHQIDL     50
                     |.|.|:||||||||.|:|...|:|||.|||:||||:|:||.:|.||:.||
BL02617___yue      1 MHLSIVTGASKGLGAAMAEGLLQKGHIVHAVSRTKSDISHDRLIQHEADL     50

BSNT_04685___     51 INLEEAEQQFETLLSSIDSDRYSGITLINNAGMVTPIKRAGEASLDELQR    100
                     ..|.|.|:.|.....|:.:..::.|||||||||||||||||||..:||:.
BL02617___yue     51 AQLAETEKWFRQFSDSVQAHDFASITLINNAGMVTPIKRAGEAEPEELRL    100

BSNT_04685___    101 HYQLNLTAPVLLSQLFTKRFASYSGKKTVVNITSGAAKNPYKGWSAYCSS    150
                     ||.|||.|||:|||||||....|.|||::|||:|||||||||||||||||
BL02617___yue    101 HYDLNLLAPVMLSQLFTKWLKPYKGKKSIVNISSGAAKNPYKGWSAYCSS    150

BSNT_04685___    151 KAGLDMFTRTFGFEQEDEELPVNMISFSPGVMDTEMQAVIRSSSKKDFHH    200
                     ||||||||:|||||||||..||.|||||||:|||.||.|||||||||||.
BL02617___yue    151 KAGLDMFTKTFGFEQEDESDPVKMISFSPGIMDTGMQEVIRSSSKKDFHE    200

BSNT_04685___    201 IERFRKLNETGSLRSPDFIAGTLLSLLEKGTENGRIYDIKEFL    243
                     ||||:.....|.|||..::||.||.|||...||||:|||||||
BL02617___yue    201 IERFKTYQTEGKLRSTSYVAGILLDLLETDFENGRVYDIKEFL    243


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