Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04666 and BL02608

See DNA alignment / Visit BSNT_04666 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence pep-align/BSNT_04666___comQ.1.5803.seq
#    -bsequence pep-align/BL02608___comQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04666___comQ-BL02608___comQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04666___comQ-BL02608___comQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04666___comQ
# 2: BL02608___comQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     133/289 (46.0%)
# Similarity:   190/289 (65.7%)
# Gaps:           2/289 ( 0.7%)
# Score: 648.0
# 
#
#=======================================

BSNT_04666___      1 MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIE     50
                     |...:|..|.|.||...|.:|:..|.|..|:|||:|||.:|.|.:..|.|
BL02608___com      1 MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAE     50

BSNT_04666___     51 LLASGIELLILSADIFDDIEDKDNLQASWMKLDPSIATNAATALYTLSLQ    100
                     .|.:|||||||:.|||||:||:|:....|||::.|:|.||||||||:|::
BL02608___com     51 TLGAGIELLILAFDIFDDLEDEDSPDEPWMKINRSVAMNAATALYTISIK    100

BSNT_04666___    101 VIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGS    150
                     ||||||..|......::|:|||:||||.||:...::|.|.::|||.|||:
BL02608___com    101 VIGSVSKEPVFFEKLMEYTLQSMQGQHDDLSNRPATEDECLDMIKRKSGA    150

BSNT_04666___    151 LVTLPSILGVYLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDF-    199
                     |..||.:||..||||:::.|||:|:..|||..||.||:..|:|.:.:|. 
BL02608___com    151 LTALPCVLGAMLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIA    200

BSNT_04666___    200 KTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMIN-NLEDLKGKLRESGVI    248
                     |.:.|||:.||..||||.|||||..:..|:.:.: .::..|.||:.:||.
BL02608___com    201 KKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCYKEKLKAAGVT    250

BSNT_04666___    249 QYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI    287
                     ||:.|:..||::.||:...:|.|.:..|.:|:..||...
BL02608___com    251 QYMYVMNQLAIQKFKKGIGELELGDMEKERLMSTLLNNN    289


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