Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03890 and BL02583
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence pep-align/BSNT_03890___yrpB.1.5803.seq
# -bsequence pep-align/BL02583___yrpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03890___yrpB-BL02583___yrpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03890___yrpB-BL02583___yrpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03890___yrpB
# 2: BL02583___yrpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 214/351 (61.0%)
# Similarity: 270/351 (76.9%)
# Gaps: 4/351 ( 1.1%)
# Score: 1132.0
#
#
#=======================================
BSNT_03890___ 1 MNEFMKKFSLTKPIIQAPMAGGITTPRLASAVSNQGALGSLASGYLTPDL 50
||:||::.||:||::|||||||.||||||:|||:.|.|||||||||||::
BL02583___yrp 1 MNQFMERLSLSKPVVQAPMAGGPTTPRLAAAVSDCGGLGSLASGYLTPEV 50
BSNT_03890___ 51 LEQQIKEMFELTDAPFQINVFVPLGLEMPPEDQIKKWKENIPLANQVNQF 100
|:|||.|..:||.|.||:|:|:|...|....::.::|:|.||||...:..
BL02583___yrp 51 LQQQILETKKLTSAGFQVNLFIPEKRETVTREEYERWQEKIPLARSASPV 100
BSNT_03890___ 101 TSVQEEWDDFYQKIDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGT 150
|..:::|||||:||::|||..:.|.||||..||.|||||||...|||:||
BL02583___yrp 101 TDEKQDWDDFYEKIEIILKEGISAVSFTFGPPPADAVKELKNRNCCLMGT 150
BSNT_03890___ 151 ASTVEEALLMEERGMDIVVLQGSEAGGHRGAFLPSKGESAVGLMALIPQA 200
|.:||||:|:||.|||::::|||||||||||||.:|||.|||.|||||||
BL02583___yrp 151 AVSVEEAVLLEELGMDVIIVQGSEAGGHRGAFLKTKGEPAVGSMALIPQA 200
BSNT_03890___ 201 ADALSVPVIAAGGMIDHRGVKAALTLGAQGVQIGSAFLICHESNAHPVHK 250
||.:|||||||||:.|.|||.||..|||||||||:|||.|.||..||.:|
BL02583___yrp 201 ADHVSVPVIAAGGIFDKRGVAAAFALGAQGVQIGTAFLTCEESGTHPAYK 250
BSNT_03890___ 251 QKILEANEADTKLTTLFSGKEARGIVNKWMEEKEQFETQTLPYPYQNTLT 300
||:.||.|.||.||.|||||.||||||:|||::.|.|.:.||||.|||||
BL02583___yrp 251 QKLFEAVETDTSLTRLFSGKPARGIVNQWMEDRRQEEAEALPYPLQNTLT 300
BSNT_03890___ 301 KAMRQQASLQNNHDQMSLWAGQGIRSLTEEISVKQLLNQLCQEDIKI--- 347
:.||:||.|..|.|.|||||||.:|:..|:.:||:|::||...|:..
BL02583___yrp 301 QPMRKQAKLDGNTDNMSLWAGQSVRATVEQTTVKELMDQLVPADVLSDHL 350
BSNT_03890___ 347 - 347
BL02583___yrp 351 N 351
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