Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04582 and BL02577
See
DNA alignment /
Visit
BSNT_04582 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:44
# Commandline: needle
# -asequence pep-align/BSNT_04582___yubA.1.5803.seq
# -bsequence pep-align/BL02577___yubA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04582___yubA-BL02577___yubA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04582___yubA-BL02577___yubA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04582___yubA
# 2: BL02577___yubA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity: 299/388 (77.1%)
# Similarity: 350/388 (90.2%)
# Gaps: 7/388 ( 1.8%)
# Score: 1590.5
#
#
#=======================================
BSNT_04582___ 1 METLQTWSGRFKRFFLDNKFVLFLLVLLLIGLNILVFTKTSFIFTPIIVL 50
|::|..|.||||:||||||||||||:|||||||||||||.||||||.|||
BL02577___yub 1 MDSLHMWGGRFKKFFLDNKFVLFLLILLLIGLNILVFTKASFIFTPFIVL 50
BSNT_04582___ 51 LKTISLPIILTGIVFYLLNPVVDFLERRRIRRIYSILLLYLLVIGLITIT 100
::||:||::|||:|:|||||:|||||.:.::|||||||||:::||||||:
BL02577___yub 51 VETIALPVVLTGVVYYLLNPIVDFLEWKNVKRIYSILLLYIVIIGLITIS 100
BSNT_04582___ 101 IVSIIPFLKEQIMSLIDNIPRYVDIVENQTKQLIGSNFVNQAQQTTNINI 150
|||:||.|:|||.||:||.||||.|||:|.||||||.|.||.|||.|||:
BL02577___yub 101 IVSVIPLLREQITSLVDNFPRYVHIVEDQIKQLIGSQFFNQVQQTMNINL 150
BSNT_04582___ 151 SDLATKVSDQAATIVNSTFTGVGNFIGALTEIIISIVTVPFILFYLLKDG 200
:|||:|:||||.||:||||||||.||||:||::|||||||||||||||||
BL02577___yub 151 TDLASKLSDQATTILNSTFTGVGTFIGAVTEVVISIVTVPFILFYLLKDG 200
BSNT_04582___ 201 KKLPVYILKFVPTQLKEQTYTVLSEMNHRLSSYIRGQIIVSFCIGFLLFI 250
||||::|||.:|.:|:||||.::||||||||||||||||||||||.||||
BL02577___yub 201 KKLPLFILKLIPVRLREQTYVMMSEMNHRLSSYIRGQIIVSFCIGCLLFI 250
BSNT_04582___ 251 GYLIIGLDYASLLAVIAACTSIVPYLGPTIAITPAIIIAIVTSPLMLLKL 300
||:|||||||||||::|||||||||||||||||||||||:||||.||:||
BL02577___yub 251 GYMIIGLDYASLLALVAACTSIVPYLGPTIAITPAIIIALVTSPFMLVKL 300
BSNT_04582___ 301 VIVWTIVQLIEGKLISPQIMGKNLHIHPITIIFLLLTAGKLFGVVGIILA 350
:||||:|||.|||.||||||||||||||:||||:||||.|||||:|:|||
BL02577___yub 301 IIVWTVVQLFEGKFISPQIMGKNLHIHPVTIIFVLLTAAKLFGVIGVILA 350
BSNT_04582___ 351 IPGYAVAKVITTHLFDWFKMRSHLYDEEKNENTPGHKV 388
||||||.||:.||||:|||.||||| ||||..
BL02577___yub 351 IPGYAVIKVVVTHLFEWFKQRSHLY--EKNEEV----- 381
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.