Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04582 and BL02577

See Amino acid alignment / Visit BSNT_04582 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence dna-align/BSNT_04582___yubA.1.5803.seq
#    -bsequence dna-align/BL02577___yubA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04582___yubA-BL02577___yubA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04582___yubA-BL02577___yubA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04582___yubA
# 2: BL02577___yubA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1195
# Identity:     845/1195 (70.7%)
# Similarity:   845/1195 (70.7%)
# Gaps:          77/1195 ( 6.4%)
# Score: 2923.5
# 
#
#=======================================

BSNT_04582___      1 GTGGAGACGTTGCAAACATGGAGCGGCAGATTCAAGCGATTCTTCTTGGA     50
                     .||||..|.|||||.|..|||.|||||||.||.||....||.||.||.||
BL02577___yub      1 ATGGACTCTTTGCATATGTGGGGCGGCAGGTTTAAAAAGTTTTTTTTAGA     50

BSNT_04582___     51 CAATAAGTTTGTTTTATTTTTGCTTGTGCTGCTGCTGATTGGTTTAAATA    100
                     ||||||.||.||..|.|||.|||||.|.|||||..||||.||..|.||.|
BL02577___yub     51 CAATAAATTCGTCCTGTTTCTGCTTATTCTGCTTTTGATCGGACTGAACA    100

BSNT_04582___    101 TTCTAGTATTTACAAAAACATCATTTATTTTCACCCCGATTATTGTTCTT    150
                     |.||.||||||||||||.||||.|||||||||||.||..|.||.||||||
BL02577___yub    101 TCCTTGTATTTACAAAAGCATCGTTTATTTTCACGCCTTTCATCGTTCTT    150

BSNT_04582___    151 CTCAAAACGATATCACTTCCGATTATTTTGACAGGCATTGTTTTTTATCT    200
                     .|..||||.||..|.||.||..|..|..|||||||..|.||||.||||.|
BL02577___yub    151 GTGGAAACCATCGCTCTGCCTGTCGTGCTGACAGGTGTCGTTTATTATTT    200

BSNT_04582___    201 GTTAAACCCGGTCGTCGATTTCCTTGAGAGAAGAAGAA--TAAGAAGAAT    248
                     ||||||.|||.||||.|||||.||  ||||..|||.||  |.|.||||||
BL02577___yub    201 GTTAAATCCGATCGTTGATTTTCT--AGAGTGGAAAAACGTGAAAAGAAT    248

BSNT_04582___    249 CTATTCTATATTGCTGCTATATCTATTGGTTATCGGGCTGATCACGATCA    298
                     .|||||.||..|.||.||.||..|..||.|.|||||.|||||||||||..
BL02577___yub    249 TTATTCGATTCTTCTTCTCTACATTGTGATCATCGGTCTGATCACGATTT    298

BSNT_04582___    299 CAATCGTGTCGATCATTCCCTTCTTAAAAGAACAAATTATGAGTTTAATC    348
                     |.|||||.||..|.||.||..|.||||..|||||.||.|..||..|..||
BL02577___yub    299 CGATCGTCTCTGTTATCCCGCTGTTAAGGGAACAGATCACAAGCCTTGTC    348

BSNT_04582___    349 GACAACATCCCAAGATATGTGGATATCGTTGAAAATCAGACGAAACAGCT    398
                     ||.|||.|||||||.|||||..|.||.||.|||.|.||.|..||||||||
BL02577___yub    349 GATAACTTCCCAAGGTATGTCCACATTGTGGAAGACCAAATTAAACAGCT    398

BSNT_04582___    399 GATCGGCAGCAACTTCGTCAATCAGGCCCAGCAAACGACGAACATCAATA    448
                     ||||||.|||.|.|||.|.|||||||.||||||.||||.||||||||||.
BL02577___yub    399 GATCGGAAGCCAGTTCTTTAATCAGGTCCAGCAGACGATGAACATCAATC    448

BSNT_04582___    449 TATCTGATCTCGCAA-CAAAGGTT-TCAGATCAGGCAGCGACAATTGTGA    496
                     |..|.|||.|.|||| ||||  || ||.||||||||..|.||.|||.|.|
BL02577___yub    449 TGACCGATTTGGCAAGCAAA--TTATCCGATCAGGCTACCACCATTTTAA    496

BSNT_04582___    497 ACAGTACCTTTACCGGCGTTGGGAA-TTTTATCGGCGCCCTGACTGAGAT    545
                     |||||||.||||||||.| |||||| .||.||.||||||.||||.|||.|
BL02577___yub    497 ACAGTACGTTTACCGGTG-TGGGAACGTTCATAGGCGCCGTGACAGAGGT    545

BSNT_04582___    546 TATCATTTCAATCGTTACGGTTCCGTTTATCCTTTTCTATTTGTTAAAGG    595
                     ..|.|||||.||.||.||.||.|||||||||||.||.||.|||||.||.|
BL02577___yub    546 CGTGATTTCGATTGTGACCGTGCCGTTTATCCTGTTTTACTTGTTGAAAG    595

BSNT_04582___    596 ACGGAAAAAAATTGCCG-------GTCTA-----CATACTGAAGTTTGTT    633
                     ||||.||||||.|||||       .||||     |||||       .|.|
BL02577___yub    596 ACGGCAAAAAACTGCCGCTGTTTATTCTAAAACTCATAC-------CGGT    638

BSNT_04582___    634 CCGACGCAATTGAAAGAACAGACATACACAGTCTTAAG-----CGAAATG    678
                     |||.|     ||...||.|||||.||     |.|.|.|     |||.|||
BL02577___yub    639 CCGCC-----TGCGGGAGCAGACGTA-----TGTGATGATGTCCGAGATG    678

BSNT_04582___    679 AATCATCGGTTAAGCTCTTATATCAGAGGCCAGATCATTGTCAGCTTCTG    728
                     |||||.|||.|.||.||.||||||||.||.||||||||.|||||||||||
BL02577___yub    679 AATCACCGGCTGAGTTCGTATATCAGGGGGCAGATCATCGTCAGCTTCTG    728

BSNT_04582___    729 TATCGGGTTTTTGCTGTTTATCGGTTATTTGATTATCGGGCTGGATTATG    778
                     ||||||.|...||.||||||||||.|||.||||.|||||.||.|||||||
BL02577___yub    729 TATCGGCTGCCTGTTGTTTATCGGATATATGATCATCGGTCTTGATTATG    778

BSNT_04582___    779 CTTC---ATTG---CTTGCAGTCATTGCGGCTTGCACAAGCATCGTTCCA    822
                     ||||   .|||   ||||      |.|||||.||.||.|||||||||||.
BL02577___yub    779 CTTCTCTTTTGGCCCTTG------TGGCGGCGTGTACGAGCATCGTTCCG    822

BSNT_04582___    823 TATTTAGGGCCAACGATTGCCATTACGCCTGCGATTATCATTGCCATAGT    872
                     |||.|.||.||.||||||||.||||||||.||.||.|||||.||..|.||
BL02577___yub    823 TATCTCGGACCGACGATTGCGATTACGCCGGCAATCATCATCGCTTTGGT    872

BSNT_04582___    873 GACATCGCCGCTCATGCTGCTTAAGCTGGTGATCGTTTGGACGATTGTTC    922
                     .||.||.|||.|.|||||..|.||||||.|.|||||||||||..|.||.|
BL02577___yub    873 CACTTCTCCGTTTATGCTTGTGAAGCTGATCATCGTTTGGACTGTGGTGC    922

BSNT_04582___    923 AGCTGATTGAAGGGAAGCTGATCTCTCCGCAAATTATGGGAAAAAACCTT    972
                     |||||.|||||||.||..|.||.||.|||||.|||||||||||||||||.
BL02577___yub    923 AGCTGTTTGAAGGAAAATTTATTTCGCCGCAGATTATGGGAAAAAACCTG    972

BSNT_04582___    973 CACATCCATCCGATTACGATTATTTTTCTGCTGTTAACAGCCGGCAAGCT   1022
                     ||||||||||||.|.||.||.||.|||.|||||.|.||.||.|.||||||
BL02577___yub    973 CACATCCATCCGGTAACAATCATCTTTGTGCTGCTGACGGCAGCCAAGCT   1022

BSNT_04582___   1023 GTTCGGCGTTGTTGGAATCATTCTTGCGATTCCCGGCTATGCGGTTGCCA   1072
                     |||||||||..|.||..|||||||.||.||.|||||.||.|||||...||
BL02577___yub   1023 GTTCGGCGTGATCGGCGTCATTCTCGCCATCCCCGGATACGCGGTCATCA   1072

BSNT_04582___   1073 AAGTCATTACGACACATTTATTTGACTGGTTTAAAATGCGGTCACATTTA   1122
                     ||||..||...||.|||||||||||.|||||||||..|||.|||||..|.
BL02577___yub   1073 AAGTGGTTGTCACGCATTTATTTGAATGGTTTAAACAGCGTTCACACCTT   1122

BSNT_04582___   1123 TACGATGAAGAAAAAAATGAAAATACGCCGGGGCATAAAGTGTGA   1167
                     |||      ||||||||.|||               .||||.|||
BL02577___yub   1123 TAC------GAAAAAAACGAA---------------GAAGTCTGA   1146


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