Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04582 and BL02577
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:44
# Commandline: needle
# -asequence dna-align/BSNT_04582___yubA.1.5803.seq
# -bsequence dna-align/BL02577___yubA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04582___yubA-BL02577___yubA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04582___yubA-BL02577___yubA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04582___yubA
# 2: BL02577___yubA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1195
# Identity: 845/1195 (70.7%)
# Similarity: 845/1195 (70.7%)
# Gaps: 77/1195 ( 6.4%)
# Score: 2923.5
#
#
#=======================================
BSNT_04582___ 1 GTGGAGACGTTGCAAACATGGAGCGGCAGATTCAAGCGATTCTTCTTGGA 50
.||||..|.|||||.|..|||.|||||||.||.||....||.||.||.||
BL02577___yub 1 ATGGACTCTTTGCATATGTGGGGCGGCAGGTTTAAAAAGTTTTTTTTAGA 50
BSNT_04582___ 51 CAATAAGTTTGTTTTATTTTTGCTTGTGCTGCTGCTGATTGGTTTAAATA 100
||||||.||.||..|.|||.|||||.|.|||||..||||.||..|.||.|
BL02577___yub 51 CAATAAATTCGTCCTGTTTCTGCTTATTCTGCTTTTGATCGGACTGAACA 100
BSNT_04582___ 101 TTCTAGTATTTACAAAAACATCATTTATTTTCACCCCGATTATTGTTCTT 150
|.||.||||||||||||.||||.|||||||||||.||..|.||.||||||
BL02577___yub 101 TCCTTGTATTTACAAAAGCATCGTTTATTTTCACGCCTTTCATCGTTCTT 150
BSNT_04582___ 151 CTCAAAACGATATCACTTCCGATTATTTTGACAGGCATTGTTTTTTATCT 200
.|..||||.||..|.||.||..|..|..|||||||..|.||||.||||.|
BL02577___yub 151 GTGGAAACCATCGCTCTGCCTGTCGTGCTGACAGGTGTCGTTTATTATTT 200
BSNT_04582___ 201 GTTAAACCCGGTCGTCGATTTCCTTGAGAGAAGAAGAA--TAAGAAGAAT 248
||||||.|||.||||.|||||.|| ||||..|||.|| |.|.||||||
BL02577___yub 201 GTTAAATCCGATCGTTGATTTTCT--AGAGTGGAAAAACGTGAAAAGAAT 248
BSNT_04582___ 249 CTATTCTATATTGCTGCTATATCTATTGGTTATCGGGCTGATCACGATCA 298
.|||||.||..|.||.||.||..|..||.|.|||||.|||||||||||..
BL02577___yub 249 TTATTCGATTCTTCTTCTCTACATTGTGATCATCGGTCTGATCACGATTT 298
BSNT_04582___ 299 CAATCGTGTCGATCATTCCCTTCTTAAAAGAACAAATTATGAGTTTAATC 348
|.|||||.||..|.||.||..|.||||..|||||.||.|..||..|..||
BL02577___yub 299 CGATCGTCTCTGTTATCCCGCTGTTAAGGGAACAGATCACAAGCCTTGTC 348
BSNT_04582___ 349 GACAACATCCCAAGATATGTGGATATCGTTGAAAATCAGACGAAACAGCT 398
||.|||.|||||||.|||||..|.||.||.|||.|.||.|..||||||||
BL02577___yub 349 GATAACTTCCCAAGGTATGTCCACATTGTGGAAGACCAAATTAAACAGCT 398
BSNT_04582___ 399 GATCGGCAGCAACTTCGTCAATCAGGCCCAGCAAACGACGAACATCAATA 448
||||||.|||.|.|||.|.|||||||.||||||.||||.||||||||||.
BL02577___yub 399 GATCGGAAGCCAGTTCTTTAATCAGGTCCAGCAGACGATGAACATCAATC 448
BSNT_04582___ 449 TATCTGATCTCGCAA-CAAAGGTT-TCAGATCAGGCAGCGACAATTGTGA 496
|..|.|||.|.|||| |||| || ||.||||||||..|.||.|||.|.|
BL02577___yub 449 TGACCGATTTGGCAAGCAAA--TTATCCGATCAGGCTACCACCATTTTAA 496
BSNT_04582___ 497 ACAGTACCTTTACCGGCGTTGGGAA-TTTTATCGGCGCCCTGACTGAGAT 545
|||||||.||||||||.| |||||| .||.||.||||||.||||.|||.|
BL02577___yub 497 ACAGTACGTTTACCGGTG-TGGGAACGTTCATAGGCGCCGTGACAGAGGT 545
BSNT_04582___ 546 TATCATTTCAATCGTTACGGTTCCGTTTATCCTTTTCTATTTGTTAAAGG 595
..|.|||||.||.||.||.||.|||||||||||.||.||.|||||.||.|
BL02577___yub 546 CGTGATTTCGATTGTGACCGTGCCGTTTATCCTGTTTTACTTGTTGAAAG 595
BSNT_04582___ 596 ACGGAAAAAAATTGCCG-------GTCTA-----CATACTGAAGTTTGTT 633
||||.||||||.||||| .|||| ||||| .|.|
BL02577___yub 596 ACGGCAAAAAACTGCCGCTGTTTATTCTAAAACTCATAC-------CGGT 638
BSNT_04582___ 634 CCGACGCAATTGAAAGAACAGACATACACAGTCTTAAG-----CGAAATG 678
|||.| ||...||.|||||.|| |.|.|.| |||.|||
BL02577___yub 639 CCGCC-----TGCGGGAGCAGACGTA-----TGTGATGATGTCCGAGATG 678
BSNT_04582___ 679 AATCATCGGTTAAGCTCTTATATCAGAGGCCAGATCATTGTCAGCTTCTG 728
|||||.|||.|.||.||.||||||||.||.||||||||.|||||||||||
BL02577___yub 679 AATCACCGGCTGAGTTCGTATATCAGGGGGCAGATCATCGTCAGCTTCTG 728
BSNT_04582___ 729 TATCGGGTTTTTGCTGTTTATCGGTTATTTGATTATCGGGCTGGATTATG 778
||||||.|...||.||||||||||.|||.||||.|||||.||.|||||||
BL02577___yub 729 TATCGGCTGCCTGTTGTTTATCGGATATATGATCATCGGTCTTGATTATG 778
BSNT_04582___ 779 CTTC---ATTG---CTTGCAGTCATTGCGGCTTGCACAAGCATCGTTCCA 822
|||| .||| |||| |.|||||.||.||.|||||||||||.
BL02577___yub 779 CTTCTCTTTTGGCCCTTG------TGGCGGCGTGTACGAGCATCGTTCCG 822
BSNT_04582___ 823 TATTTAGGGCCAACGATTGCCATTACGCCTGCGATTATCATTGCCATAGT 872
|||.|.||.||.||||||||.||||||||.||.||.|||||.||..|.||
BL02577___yub 823 TATCTCGGACCGACGATTGCGATTACGCCGGCAATCATCATCGCTTTGGT 872
BSNT_04582___ 873 GACATCGCCGCTCATGCTGCTTAAGCTGGTGATCGTTTGGACGATTGTTC 922
.||.||.|||.|.|||||..|.||||||.|.|||||||||||..|.||.|
BL02577___yub 873 CACTTCTCCGTTTATGCTTGTGAAGCTGATCATCGTTTGGACTGTGGTGC 922
BSNT_04582___ 923 AGCTGATTGAAGGGAAGCTGATCTCTCCGCAAATTATGGGAAAAAACCTT 972
|||||.|||||||.||..|.||.||.|||||.|||||||||||||||||.
BL02577___yub 923 AGCTGTTTGAAGGAAAATTTATTTCGCCGCAGATTATGGGAAAAAACCTG 972
BSNT_04582___ 973 CACATCCATCCGATTACGATTATTTTTCTGCTGTTAACAGCCGGCAAGCT 1022
||||||||||||.|.||.||.||.|||.|||||.|.||.||.|.||||||
BL02577___yub 973 CACATCCATCCGGTAACAATCATCTTTGTGCTGCTGACGGCAGCCAAGCT 1022
BSNT_04582___ 1023 GTTCGGCGTTGTTGGAATCATTCTTGCGATTCCCGGCTATGCGGTTGCCA 1072
|||||||||..|.||..|||||||.||.||.|||||.||.|||||...||
BL02577___yub 1023 GTTCGGCGTGATCGGCGTCATTCTCGCCATCCCCGGATACGCGGTCATCA 1072
BSNT_04582___ 1073 AAGTCATTACGACACATTTATTTGACTGGTTTAAAATGCGGTCACATTTA 1122
||||..||...||.|||||||||||.|||||||||..|||.|||||..|.
BL02577___yub 1073 AAGTGGTTGTCACGCATTTATTTGAATGGTTTAAACAGCGTTCACACCTT 1122
BSNT_04582___ 1123 TACGATGAAGAAAAAAATGAAAATACGCCGGGGCATAAAGTGTGA 1167
||| ||||||||.||| .||||.|||
BL02577___yub 1123 TAC------GAAAAAAACGAA---------------GAAGTCTGA 1146
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