Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02246 and BL02575

See DNA alignment / Visit BSNT_02246 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_02246___ykoQ.1.5803.seq
#    -bsequence pep-align/BL02575___ykoQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02246___ykoQ-BL02575___ykoQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02246___ykoQ-BL02575___ykoQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02246___ykoQ
# 2: BL02575___ykoQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     203/271 (74.9%)
# Similarity:   230/271 (84.9%)
# Gaps:           1/271 ( 0.4%)
# Score: 1104.0
# 
#
#=======================================

BSNT_02246___      1 MFTILLSLAILVFVPFLYKANRNTKDVKVNTISIDQKDGLPARKKLNILH     50
                     ||.|...|.||..:|||||||.|||||||||||:::......:|||||||
BL02575___yko      1 MFIIACLLIILGLMPFLYKANHNTKDVKVNTISVERVQAPALKKKLNILH     50

BSNT_02246___     51 LSDLHLENISVSPEELYHLTKDQPVDIIALIGDFLDRKRNIPKLAGYLNA    100
                     ||||||||||:|||.:..|...:.||:|||.||||||||||||||.||.|
BL02575___yko     51 LSDLHLENISISPERILELANKKRVDLIALTGDFLDRKRNIPKLANYLKA    100

BSNT_02246___    101 LQKLKPAYGMYAVFGNHDYVLKEEDFQRLKRVLEENGCITLQNEHVRIET    150
                     |:|||||||||||||||||:||:|.|::||||||:||||||||:||.||.
BL02575___yko    101 LKKLKPAYGMYAVFGNHDYLLKDEHFRKLKRVLEDNGCITLQNQHVSIEV    150

BSNT_02246___    151 AAGPVNIIGIDDYSTNRSNITGSYQSLENGYYLVLTHDPNIILDMKDVHY    200
                     ....:||||||||||.||:|.|||:.|:.||.||||||||::|||::.|:
BL02575___yko    151 EGETLNIIGIDDYSTKRSDIAGSYKGLKEGYNLVLTHDPNVVLDMQEFHF    200

BSNT_02246___    201 DYLLSGHFHGGQIHWPKPYHLVKMGNLVRMNMIKGLHYHHDKPFYISEGL    250
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BL02575___yko    201 DYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHHDKPFYISEGL    250

BSNT_02246___    251 GQTGVNIRVGSRPEVTFHQI-    270
                     ||||.|||:|||||:|||.| 
BL02575___yko    251 GQTGANIRIGSRPEMTFHHIS    271


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