Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02244 and BL02574

See DNA alignment / Visit BSNT_02244 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_02244___ykoN.1.5803.seq
#    -bsequence pep-align/BL02574___ykoN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02244___ykoN-BL02574___ykoN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02244___ykoN-BL02574___ykoN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02244___ykoN
# 2: BL02574___ykoN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity:     220/384 (57.3%)
# Similarity:   280/384 (72.9%)
# Gaps:          18/384 ( 4.7%)
# Score: 1169.0
# 
#
#=======================================

BSNT_02244___      1 MKNILIFPFLSISTGHHHVADALQAELESQGLAAEKIDIFSHAYSRLEKL     50
                     |..||||||||||||||||||:||.||..:....||||||||||.||||.
BL02574___yko      1 MTKILIFPFLSISTGHHHVADSLQTELLLKSHHCEKIDIFSHAYRRLEKA     50

BSNT_02244___     51 SSVAYLKWIQYFPKTYSGIYRLLACGEFQHDKRFFMYEWLFTQQMRHILQ    100
                     ||.|||.|||||||.||.:|.|||||..:..||..:||.:|.:.|:.|:.
BL02574___yko     51 SSAAYLSWIQYFPKVYSSVYHLLACGRHETAKRHLLYELIFLKGMQQIIA    100

BSNT_02244___    101 EKQPDIAFCTHALPSYLLNRLKPEYPNLTVVNVYTDFFVNQLWGRKNIDY    150
                     ||:|||.|||||||||||||||.::|::.|.|||||||||::|||:.|||
BL02574___yko    101 EKKPDIVFCTHALPSYLLNRLKGQFPDMKVANVYTDFFVNRIWGREKIDY    150

BSNT_02244___    151 HFVPSTEVKKQLISEGIDQNNIYLTGIPVHRNFEMESADTLQHHPPY---    197
                     ||.|..::|.|||:||:|:..|:||||||||:::.|      ..|..   
BL02574___yko    151 HFAPIKDIKDQLIAEGVDEEKIFLTGIPVHRSYKTE------RKPEQDGD    194

BSNT_02244___    198 -----TIIITGGSMGVGGILKWVQELSPGGKILYKILCGRNEKLYSYVKS    242
                          .|:|||||||||||.|.|:||||.|.:.|:||||:|.|||.||:.
BL02574___yko    195 KKAFCNILITGGSMGVGGIFKLVRELSPNGNVAYQILCGKNRKLYRYVRD    244

BSNT_02244___    243 LHHPLIEAIPYLHSKAEMNRLYEQSTGIMTKPGGVTISECLQKRLPVFIY    292
                     |::|.|:|:||:.||.||||||.:::||:|||||||||||::|:||||||
BL02574___yko    245 LNNPYIKALPYIESKTEMNRLYAEASGIITKPGGVTISECIEKQLPVFIY    294

BSNT_02244___    293 HALPGQEEMNLNLLHEKKLVTDMRNWDMQKAEEYIAAFFQSNEQMKEYKK    342
                     |||||||||||::|.:|.||.::.....|..|:.:.:||:|:|.::.|:.
BL02574___yko    295 HALPGQEEMNLDILKKKNLVIELNQQKQQPIEQQLLSFFRSDEDIRRYQM    344

BSNT_02244___    343 HVIGYLGEMSDRKIEDVLKRIIWKQK---NTLLK    373
                     .|..||.|.|||...|:|..||..:.   |..: 
BL02574___yko    345 SVDQYLREKSDRDFSDILDGIIHNRSGLGNAHV-    377


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