Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02244 and BL02574
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence pep-align/BSNT_02244___ykoN.1.5803.seq
# -bsequence pep-align/BL02574___ykoN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02244___ykoN-BL02574___ykoN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02244___ykoN-BL02574___ykoN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02244___ykoN
# 2: BL02574___ykoN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 220/384 (57.3%)
# Similarity: 280/384 (72.9%)
# Gaps: 18/384 ( 4.7%)
# Score: 1169.0
#
#
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BSNT_02244___ 1 MKNILIFPFLSISTGHHHVADALQAELESQGLAAEKIDIFSHAYSRLEKL 50
|..||||||||||||||||||:||.||..:....||||||||||.||||.
BL02574___yko 1 MTKILIFPFLSISTGHHHVADSLQTELLLKSHHCEKIDIFSHAYRRLEKA 50
BSNT_02244___ 51 SSVAYLKWIQYFPKTYSGIYRLLACGEFQHDKRFFMYEWLFTQQMRHILQ 100
||.|||.|||||||.||.:|.|||||..:..||..:||.:|.:.|:.|:.
BL02574___yko 51 SSAAYLSWIQYFPKVYSSVYHLLACGRHETAKRHLLYELIFLKGMQQIIA 100
BSNT_02244___ 101 EKQPDIAFCTHALPSYLLNRLKPEYPNLTVVNVYTDFFVNQLWGRKNIDY 150
||:|||.|||||||||||||||.::|::.|.|||||||||::|||:.|||
BL02574___yko 101 EKKPDIVFCTHALPSYLLNRLKGQFPDMKVANVYTDFFVNRIWGREKIDY 150
BSNT_02244___ 151 HFVPSTEVKKQLISEGIDQNNIYLTGIPVHRNFEMESADTLQHHPPY--- 197
||.|..::|.|||:||:|:..|:||||||||:::.| ..|..
BL02574___yko 151 HFAPIKDIKDQLIAEGVDEEKIFLTGIPVHRSYKTE------RKPEQDGD 194
BSNT_02244___ 198 -----TIIITGGSMGVGGILKWVQELSPGGKILYKILCGRNEKLYSYVKS 242
.|:|||||||||||.|.|:||||.|.:.|:||||:|.|||.||:.
BL02574___yko 195 KKAFCNILITGGSMGVGGIFKLVRELSPNGNVAYQILCGKNRKLYRYVRD 244
BSNT_02244___ 243 LHHPLIEAIPYLHSKAEMNRLYEQSTGIMTKPGGVTISECLQKRLPVFIY 292
|::|.|:|:||:.||.||||||.:::||:|||||||||||::|:||||||
BL02574___yko 245 LNNPYIKALPYIESKTEMNRLYAEASGIITKPGGVTISECIEKQLPVFIY 294
BSNT_02244___ 293 HALPGQEEMNLNLLHEKKLVTDMRNWDMQKAEEYIAAFFQSNEQMKEYKK 342
|||||||||||::|.:|.||.::.....|..|:.:.:||:|:|.::.|:.
BL02574___yko 295 HALPGQEEMNLDILKKKNLVIELNQQKQQPIEQQLLSFFRSDEDIRRYQM 344
BSNT_02244___ 343 HVIGYLGEMSDRKIEDVLKRIIWKQK---NTLLK 373
.|..||.|.|||...|:|..||..:. |..:
BL02574___yko 345 SVDQYLREKSDRDFSDILDGIIHNRSGLGNAHV- 377
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