Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02448 and BL02565

See DNA alignment / Visit BSNT_02448 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_02448___yktD.1.5803.seq
#    -bsequence pep-align/BL02565.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02448___yktD-BL02565.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02448___yktD-BL02565.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02448___yktD
# 2: BL02565
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     200/307 (65.1%)
# Similarity:   246/307 (80.1%)
# Gaps:           3/307 ( 1.0%)
# Score: 1081.0
# 
#
#=======================================

BSNT_02448___      1 MRKNESSLTSLISAFARAYHSRYDTPLIFDDFIAKDLINEKEFIDISKNM     50
                     |:|:|||:|||||||.|||||:||.|.||||.:||.||:::||.||..:.
BL02565            1 MKKDESSITSLISAFGRAYHSQYDEPKIFDDNLAKSLISQQEFADIKNSF     50

BSNT_02448___     51 IQGISFFNKEIAERLQNDPEKILKWVAQIQLSPTPLARASYCEKVLHNEL    100
                     ||||.||||.|||:.:.|.|:||:|:.|:||||||||||:|||:|||:|:
BL02565           51 IQGIQFFNKAIAEKYEGDDEEILRWITQVQLSPTPLARAAYCERVLHHEI    100

BSNT_02448___    101 MLGAKQYVILGAGLDTFCFRHPELENSLQVFEVDHPATQQFKKNKLKDAN    150
                     .||.:|||||||||||||||:.||::.:.:||:||||||:.||.||..|.
BL02565          101 RLGTEQYVILGAGLDTFCFRNLELKDKIDIFEIDHPATQKLKKEKLDKAG    150

BSNT_02448___    151 LTIPGHLHFVPMDFTKTFSYDPLLDEGFK-NTKTFFSLLGVSYYVTQEEN    199
                     ..||.||||:|:||.|:|||..|.|:||. |.|||||.||||||:|:||.
BL02565          151 FHIPDHLHFIPLDFAKSFSYQELADKGFHFNKKTFFSFLGVSYYLTKEET    200

BSNT_02448___    200 ASLISNLFSHVPPGSSIVFDYADETLFTAKGTSNRVEHMVKMAAASGEPM    249
                     ..|:..|.:.:|.|||||||||||.||..||..||||:|||||||.||||
BL02565          201 EKLLGELMADLPSGSSIVFDYADENLFKEKGFFNRVENMVKMAAAGGEPM    250

BSNT_02448___    250 KSCFTYQEIEHLLESSGLLIYEHLSPDDINDLFFSNRKDNLSAFETIHYI    299
                     |||::||:|:|:|:.||||:||||||.||...:|.||||:||||||||||
BL02565          251 KSCYSYQKIQHMLQQSGLLVYEHLSPSDIQGRYFKNRKDDLSAFETIHYI    300

BSNT_02448___    300 HAVTSVA    306
                     .||..  
BL02565          301 LAVKK--    305


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