Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02448 and BL02565
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02448___yktD.1.5803.seq
# -bsequence dna-align/BL02565.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02448___yktD-BL02565.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02448___yktD-BL02565.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02448___yktD
# 2: BL02565
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 970
# Identity: 658/970 (67.8%)
# Similarity: 658/970 (67.8%)
# Gaps: 101/970 (10.4%)
# Score: 2063.0
#
#
#=======================================
BSNT_02448___ 1 ATGAGGAAAAATGAGTCCAGCTTAACGTCTCTAATTTCAGCTTTTGCCCG 50
||||..|||.||||.||.||..|||||||.||.|||||.|||||||.|.|
BL02565 1 ATGAAAAAAGATGAATCGAGTATAACGTCCCTTATTTCGGCTTTTGGCAG 50
BSNT_02448___ 51 TGCATATCACAGCCGATATGACACACCTCTTATTTTTGATGATTTTATCG 100
.||.||||||||||..|||||...|||....||.|||||||||..|.|.|
BL02565 51 AGCTTATCACAGCCAGTATGATGAACCAAAAATCTTTGATGATAATCTGG 100
BSNT_02448___ 101 CAAAAGATCTCATTAACGAAAAAGAGTTTATCGACATCAGTAAAAATA-- 148
|.|||...||||||..|.||.||||.|||...||.||| |||||.|
BL02565 101 CCAAATCGCTCATTTCCCAACAAGAATTTGCTGATATC---AAAAACAGC 147
BSNT_02448___ 149 -TGATTCAAGGAATATCGTTTTTCAACAAAGAGATCGCCGAACGTCTTCA 197
|.||||||||.|||..|||.||||||||||..||.||.|| |
BL02565 148 TTCATTCAAGGCATACAGTTCTTCAACAAAGCTATAGCGGA--------A 189
BSNT_02448___ 198 AAAT--------GATCCTGAAAAAATATTAAAATGGGTTGCACAAATCCA 239
|||| ||...||||.|||||||||.||||.|..|||||.|.||
BL02565 190 AAATACGAGGGAGACGATGAAGAAATATTAAGATGGATCACACAAGTTCA 239
BSNT_02448___ 240 GCTGTCTCCCACGCCCCTAGCACGTGCTTCTTATTGTGAAAAAGTCTTGC 289
|||.|||||.|||||.||.||.|||||..|||||||.||||.|||..|||
BL02565 240 GCTCTCTCCGACGCCGCTCGCCCGTGCCGCTTATTGCGAAAGAGTGCTGC 289
BSNT_02448___ 290 ACAACGA-ATTAATGC-TGGGAGCAAAACAGTATGTCATTCTTGGAGCGG 337
|..|.|| ||| ..|| ||||| ||.||||.||.||.||||||||.||.|
BL02565 290 ATCATGAGATT-CGGCTTGGGA-CAGAACAATACGTGATTCTTGGGGCAG 337
BSNT_02448___ 338 GGCTGGATACTTTCTGCTTTCGGCATCCAGAATTA---GAAAACAGCTT- 383
||||||||||||||||.||||||.|.|.|||.||| ||.||.| ||
BL02565 338 GGCTGGATACTTTCTGTTTTCGGAACCTAGAGTTAAAGGACAAAA--TTG 385
BSNT_02448___ 384 ACAGGTTTTCGAGGTTGACCATCCGGCTACACAGCAATTCAAAAAAAATA 433
|.| |.||.||..|||||||.||.||.||||||.||||.|||||..|.|
BL02565 386 ATA--TCTTTGAAATTGACCACCCAGCGACACAGAAATTGAAAAAGGAAA 433
BSNT_02448___ 434 AGCTGAAGGATGCAAA------TCTGACAATTCCGGGTCATCTTCATTTT 477
|||||.| |||| |.|.|| ||.||||..||.|||||||||
BL02565 434 AGCTGGA-----CAAAGCCGGTTTTCAC-ATCCCGGACCACCTTCATTTT 477
BSNT_02448___ 478 GTTCCTATGGATTTCACCAAAACGTTTTCATAT---GATCCTCTTTTAGA 524
.|||||.||||.||..||||..|||||||.||| || .||.|.
BL02565 478 ATTCCTTTGGACTTTGCCAAGTCGTTTTCTTATCAAGA------ATTGGC 521
BSNT_02448___ 525 TG--AAGG------ATTTAAGAACACAAAAACATTCTTCAGCCTTCTCGG 566
|| |||| |||| .||||.||||||.|||||||||.||.|.||
BL02565 522 TGATAAGGGTTTTCATTT--TAACAAAAAAACGTTCTTCAGCTTTTTAGG 569
BSNT_02448___ 567 AGTGTCTTATTATGTAACACAGGAAGAAAATGCAA----GCTTGATAAGC 612
.||.|||||.||..|||||.|||||||||..|.|| |||.| |.
BL02565 570 CGTTTCTTACTACTTAACAAAGGAAGAAACCGAAAAACTGCTCG----GG 615
BSNT_02448___ 613 AATTTATTTTCTCATGTCCCGCCTGGAAGCTCTATTGTTTTTGATTATGC 662
.|.|||.|..||.|..||||..|.||.||.||.||.|||||.||||||||
BL02565 616 GAATTAATGGCTGACCTCCCTTCAGGCAGTTCGATCGTTTTCGATTATGC 665
BSNT_02448___ 663 GGACGAAACACTT-TTTACAGCAAAAGGGACGTC--GAATCGAGTTGAAC 709
.||.|||| |||| ||||.||..||||| |.|| .||..|.||.|||.
BL02565 666 TGATGAAA-ACTTGTTTAAAGAGAAAGG--CTTCTTCAACAGGGTGGAAA 712
BSNT_02448___ 710 ATATGGTGAAGATGGCTGCCGCAAGCGGGGAACCGATGAAATCATGTTTC 759
|||||||.||.|||||.||.|||.|.||.|||||||||||||||||.|..
BL02565 713 ATATGGTAAAAATGGCAGCGGCAGGAGGAGAACCGATGAAATCATGCTAT 762
BSNT_02448___ 760 ACTTATCAAGAGATT---GAACAT-CTGTTAGAGTCATCTGGTTTACTGA 805
.|.|||| |||.|.| |.|||| ||| .||..|||.|| ||||.
BL02565 763 TCGTATC-AGAAAATACAGCACATGCTG---CAGCAATCCGG---ACTGC 805
BSNT_02448___ 806 TC---TATGAACATCTATCACCAGACGACA-TCAATGACCTTTTCTTTAG 851
|| ||.||.|||.|||||||....||.| ||||.|.|.||.| ||||.
BL02565 806 TCGTTTACGAGCATTTATCACCTTCAGATATTCAAGGGCGTTAT-TTTAA 854
BSNT_02448___ 852 TAATCGAAAAGACAATTTGTCAGCGTTTGAAACGATTCATTATATTCATG 901
.|||||||||||..||.|||||||.|||||||||||||||||.||||.||
BL02565 855 AAATCGAAAAGATGATCTGTCAGCCTTTGAAACGATTCATTACATTCTTG 904
BSNT_02448___ 902 CGGTCACTAGTGTTGCATAA 921
|.||.|..| .||||
BL02565 905 CCGTAAAAA------AATAA 918
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