Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04563 and BL02562
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence pep-align/BSNT_04563___yuaD.1.5803.seq
# -bsequence pep-align/BL02562___yuaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04563___yuaD-BL02562___yuaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04563___yuaD-BL02562___yuaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04563___yuaD
# 2: BL02562___yuaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 133/193 (68.9%)
# Similarity: 159/193 (82.4%)
# Gaps: 1/193 ( 0.5%)
# Score: 723.0
#
#
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BSNT_04563___ 1 MWKRMTAKAEGLYIAETESFVTKQMDKLDFDYGGIPGDLHFGLTKKAGAR 50
|||:.||.||.:|||:|.||||::..|:..||||||||||||||||||||
BL02562___yua 1 MWKKRTAVAEHVYIADTASFVTEKQAKIVIDYGGIPGDLHFGLTKKAGAR 50
BSNT_04563___ 51 EPMFSRGTEIFNRRQISIVSIEECNEIALKMGVPRILPEWLGANVAVSGM 100
|||:.|||||||||||||||:|||.|||.::.:|.:||||||||:|:||:
BL02562___yua 51 EPMYKRGTEIFNRRQISIVSVEECLEIAGRLNIPAVLPEWLGANIALSGL 100
BSNT_04563___ 101 PDLTSLKEGSRIIFPSGAALLCEGENDPCIQPGEVIQSYYPDKPKLTPAF 150
||||||:|||||:|||||:||.||||:||||||||||..:||||||...|
BL02562___yua 101 PDLTSLREGSRIVFPSGASLLSEGENEPCIQPGEVIQEQFPDKPKLASRF 150
BSNT_04563___ 151 VRHALGIRGIVCIVERPGAVYTGDEIEVHSYQRKVKRKAERV- 192
||||:|.|||||||||||.::.||:.||.:|.....:.|...
BL02562___yua 151 VRHAMGRRGIVCIVERPGLIHQGDQAEVWAYSPAAMKDARSFA 193
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