Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05138 and BL02556
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:15
# Commandline: needle
# -asequence pep-align/BSNT_05138___araR.1.5803.seq
# -bsequence pep-align/BL02556___araR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05138___araR-BL02556___araR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05138___araR-BL02556___araR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05138___araR
# 2: BL02556___araR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity: 200/374 (53.5%)
# Similarity: 256/374 (68.4%)
# Gaps: 20/374 ( 5.3%)
# Score: 986.0
#
#
#=======================================
BSNT_05138___ 1 --MLPKYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRKAI 48
.|.||:.||.||.|||.:||:.|.:||.:|||||:.|.|||||||:||
BL02556___ara 1 MSELTKYSMVKNEIKSWIYEGKVKPGEKIHSENELMKIFDVSRHTIRQAI 50
BSNT_05138___ 49 GDLVSQGLLYSVQGGGTFVASR--SAKSALHSNKTIGVLTTYISDYIFPS 96
||||.:||||..||.||:.:.| .::.....||.|||:|||:|||||||
BL02556___ara 51 GDLVHEGLLYREQGSGTYCSHRLQLSEKGRERNKMIGVITTYLSDYIFPS 100
BSNT_05138___ 97 IIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKS 146
|||||||.||..||::::.||||:.:.|::.|.|:|.:.||||||||||:
BL02556___ara 101 IIRGIESSLSSAGYTLVVASTNNDIEKEKQCLVNMLDKKIDGLIVEPTKT 150
BSNT_05138___ 147 ALQTPNIGYYLNLEKNGIPFAMINASYAELAAPSFTLDDVKGGMMAAEHL 196
....||:.|||.||::.||:.|||..|.||..|.|.|||..||.:|.|||
BL02556___ara 151 GSFNPNLNYYLTLEQHHIPYLMINQLYQELNPPHFILDDEHGGFIATEHL 200
BSNT_05138___ 197 LSLGHTHMMGIFKADDTQGVKRMNGFIQAHRERELFPSPDMIVTFTTEEK 246
:.|||..:.|.||.||.|||.||.|||:|.||..|...|:|:||:|||.|
BL02556___ara 201 IKLGHEKVFGFFKQDDMQGVNRMKGFIRAFRENGLSFYPEMVVTYTTENK 250
BSNT_05138___ 247 ESKLLEKVKATLEKNSKHMPTAILCYNDEIALKVIDMLREMDLKVPEDMS 296
:.|.:.:.:..| :|...||||.||||||||.|:|::||..||||:|:|
BL02556___ara 251 KEKTIAEARKRL--SSADRPTAIFCYNDEIALIVLDVVREFGLKVPDDIS 298
BSNT_05138___ 297 IVGYDDSHFAQISEVKLTSVKHPKSVLGKAAAKYVI--------DCLEHK 338
||||||||.::.||||||||.|||..:|..|||::| |.|||
BL02556___ara 299 IVGYDDSHLSEASEVKLTSVTHPKMQMGIEAAKWMIAKVEGRNTDKLEH- 347
BSNT_05138___ 339 KPKQEDVIFEPELIIRQSARKLNE 362
..:::|||::|.|..|...
BL02556___ara 348 -----STVYKPELVVRHSTAKPKR 366
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