Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05138 and BL02556
See
Amino acid alignment /
Visit
BSNT_05138 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:15
# Commandline: needle
# -asequence dna-align/BSNT_05138___araR.1.5803.seq
# -bsequence dna-align/BL02556___araR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05138___araR-BL02556___araR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05138___araR-BL02556___araR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05138___araR
# 2: BL02556___araR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1185
# Identity: 719/1185 (60.7%)
# Similarity: 719/1185 (60.7%)
# Gaps: 180/1185 (15.2%)
# Score: 1870.5
#
#
#=======================================
BSNT_05138___ 1 ATG-------TTACCAAAATACGCGCA-AGTAAAAGAAGAAATCAGTTCA 42
||| |.| |||||||| .||| .||.|||.|.|||||.|..||.
BL02556___ara 1 ATGAGTGAACTCA-CAAAATAC-AGCATGGTGAAAAATGAAATTAAATCG 48
BSNT_05138___ 43 TGGATTAATCAAGGCAAAATACTGCCCGATCAAAAAATCCCTACCGAAAA 92
|||||..||.||||||||.|...|||.|...|||||||||.|.|.|||||
BL02556___ara 49 TGGATATATGAAGGCAAAGTGAAGCCGGGCGAAAAAATCCATTCGGAAAA 98
BSNT_05138___ 93 CGAATTAATGCAGCAATTCGGCGTCAGCCGGCATACCATCCGCAAAGCGA 142
||||||.|||.|...|||.|..||.|||.|||||||.|||||..||||.|
BL02556___ara 99 CGAATTGATGAAAATATTTGATGTGAGCAGGCATACGATCCGGCAAGCAA 148
BSNT_05138___ 143 TCGGAGACCTCGTATCA-CAAGGTCTGCTGTACAGCGTGCAAGGCGGAGG 191
|.||.|||||.|| ||| .||||.||..|.|||||.|.|||||||..|||
BL02556___ara 149 TTGGCGACCTTGT-TCATGAAGGGCTTTTATACAGAGAGCAAGGCTCAGG 197
BSNT_05138___ 192 CACCT-TTGTCGCTTCACGCTCTGCTAAGTCAGCG-CTGCA---TTC--- 233
.||.| || |||| |||.|| ||||| |||
BL02556___ara 198 GACGTATT----------GCTC-------TCACCGCCTGCAGCTTTCTGA 230
BSNT_05138___ 234 ---------------CAATAAAACGATCGGTGTTTTGACAACCTACATAT 268
.|||||.|.|||.||.||..|.||.||.|||.|.|
BL02556___ara 231 AAAAGGAAGGGAAAGAAATAAGATGATTGGGGTCATTACGACTTACCTTT 280
BSNT_05138___ 269 CAGACTATATTTTCCCGAGCATCATCAGAGGAATCGAGTCCT-ATTTAAG 317
|.||.||.|||||.||....||.||.|||||||||||.||.| |||...|
BL02556___ara 281 CGGATTACATTTTTCCTTCTATTATAAGAGGAATCGAATCTTCATTGTCG 330
BSNT_05138___ 318 CGAGCAGGGGTATT----CTATGCTTTTGACAAGCACAAACAACAACCCG 363
.|.||||| || || ||.|..|..|.|||||.||.||..||...
BL02556___ara 331 AGTGCAGG----TTACACCT-TGGTCGTCGCGAGCACGAATAATGACATT 375
BSNT_05138___ 364 GACAACGAAAGAAGA--GGCTTAGAAAACCTGCTGTCCCAGCATATTGAC 411
||.||.|||| ||.| |.||| |.|||..||||...|.|..|.|||||.
BL02556___ara 376 GAAAAAGAAA-AACAATGTCTT-GTAAATATGCTTGACAAAAAAATTGAT 423
BSNT_05138___ 412 GGACTCATCGTAGAACCGACAAAAAGCGCC--CTTCAAACCCCAA---AC 456
||..|.||.||.||.|||||.||||.||.| ||| .||.||.|| |.
BL02556___ara 424 GGGTTGATTGTGGAGCCGACGAAAACCGGCAGCTT-TAATCCGAATTTAA 472
BSNT_05138___ 457 ATCGGCTATTATCTGAACTTGGAAAAAAACGGCATTCCTTTTGCGATGAT 506
|| ||.|||||||.|.|.|||.|..||...||.||.|.|..||||||
BL02556___ara 473 AT----TACTATCTGACCCTTGAACAGCACCATATACCATATTTGATGAT 518
BSNT_05138___ 507 TAACGCGTCATATGCCGAGCTTGCCGCGCCGAGTTTTACCTTGGATGATG 556
.|||...|.||||...|||.|...|.||||...|||.|..||||||||||
BL02556___ara 519 CAACCAATTATATCAGGAGTTAAACCCGCCTCATTTCATTTTGGATGATG 568
BSNT_05138___ 557 TGAAAGGCGGGATGATGGCGGCGGAGCATTTGCTTTCTCTCGGCCACACG 606
.|.|.|||||..|.||.||..|||||||||||.||...||.||| ||.|
BL02556___ara 569 AGCACGGCGGTTTTATCGCCACGGAGCATTTGATTAAGCTAGGC--CATG 616
BSNT_05138___ 607 CATA--TGATGGGTATTTTTAAAGCTGATGACACACAAGGCGTGAAACGG 654
.|.| ||.|.|||.||||||||...||.||.|..||.|||||.||.|||
BL02556___ara 617 AAAAAGTGTTCGGTTTTTTTAAACAGGACGATATGCAGGGCGTCAACCGG 666
BSNT_05138___ 655 ATGAACGGATTTATACAGGCGCACCGGGA-----GCGTGAGTTGTTTCCT 699
|||||.||||||||.|.|||...|.|||| ||.| ||.||| |
BL02556___ara 667 ATGAAAGGATTTATCCGGGCTTTCAGGGAAAACGGCTT--GTCGTT---T 711
BSNT_05138___ 700 TCTCCGGATATGATCGTGACATTTACAACGGAAG----AAAAAGAATCAA 745
|.||||||.|||.|||||||.|..|||||.| || |||||||| ||
BL02556___ara 712 TATCCGGAGATGGTCGTGACTTACACAACAG-AGAACAAAAAAGAA--AA 758
BSNT_05138___ 746 AAC---TTCTGGAGAAAGTAAAAG-----CCACACTGGAGAAAAACAGCA 787
||| |.|||..|.|||.||..| ||.|| |.|| ||.||
BL02556___ara 759 AACGATTGCTGAGGCAAGGAAGCGGCTTTCCTCA--GCAG----ACCGC- 801
BSNT_05138___ 788 AGCACATGCCGACAGCCATTCTTTGTTATAACGATGAAATTGCGCTGAAG 837
|||||.|||||..|.||.|||||.|||||.||.||.||.|..
BL02556___ara 802 --------CCGACTGCCATATTCTGCTATAATGATGAGATAGCACTTATA 843
BSNT_05138___ 838 GTGATTGATATGCTGAGGGAGATGGATCTTAAAGTGCCGGAGGATATGTC 887
|||.|.|||.|..|.|||||..|.|.|.|.|||||.|||||.||.||.||
BL02556___ara 844 GTGTTGGATGTCGTAAGGGAATTCGGTTTGAAAGTACCGGACGACATATC 893
BSNT_05138___ 888 TATTGTCGGGTACGATGATTCACATTT--------CGCCCAAATCTCAGA 929
.||||||||.||.||.||.|||||.|| || ||.||
BL02556___ara 894 AATTGTCGGATATGACGACTCACACTTGAGCGAGGCG--------TCTGA 935
BSNT_05138___ 930 AGTGAAACTAACCTCTGTCAAACATCCGAAATCAGTGC---TTGGAAAAG 976
||||||.||.||.||.||||..|||||||| |.||| |.||.|..|
BL02556___ara 936 AGTGAAGCTGACATCAGTCACCCATCCGAA---AATGCAGATGGGGATTG 982
BSNT_05138___ 977 CAGCCGCCAAAT--ATGTCATTGACTGCTTAGAG---CATAAAAAGCCGA 1021
..||.||.|||| ||| ||||.|....|.||| |..||.|.|...|
BL02556___ara 983 AGGCGGCAAAATGGATG--ATTGCCAAAGTTGAGGGACGGAACACGGATA 1030
BSNT_05138___ 1022 AGCAAGAGGAT------GTC-ATATTTGAGCCTGA----GTTGAT----C 1056
|||..|||.|| ||| ||| |.||||| |||| | |
BL02556___ara 1031 AGCTTGAGCATTCTACCGTCTATA----AACCTGAACTTGTTG-TCAGAC 1075
BSNT_05138___ 1057 ATTCGCCAGTCC--GCACGAAAACTGAATGAATAA 1089
|||||.|.| || || ||||||...|.
BL02556___ara 1076 ATTCGACCG-CCAAGC-CGAAAAGGTAG------- 1101
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.