Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04656 and BL02548

See DNA alignment / Visit BSNT_04656 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence pep-align/BSNT_04656___mrpE.1.5803.seq
#    -bsequence pep-align/BL02548___mrpE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04656___mrpE-BL02548___mrpE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04656___mrpE-BL02548___mrpE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04656___mrpE
# 2: BL02548___mrpE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     110/158 (69.6%)
# Similarity:   134/158 (84.8%)
# Gaps:           0/158 ( 0.0%)
# Score: 569.0
# 
#
#=======================================

BSNT_04656___      1 MAFQILLNVFLAFCWMFLSNSPSAAGFITGYILGMLSLFFFRRFFTRQFY     50
                     ||.|||||..||.|||||:|..:||||:.||::|:.|||..||||.|:||
BL02548___mrp      1 MALQILLNFILALCWMFLNNDYTAAGFVIGYVIGLFSLFLMRRFFRRRFY     50

BSNT_04656___     51 LWKLISIIKLCFIFIKELYLANVSVMKSVLSPKLNIRPGIFAFKTELTKD    100
                     |..:.:|::|.|||||||.||||||:|::|||:|..:||||||||:|..|
BL02548___mrp     51 LINIWAIVRLLFIFIKELVLANVSVLKTILSPRLKNKPGIFAFKTDLKAD    100

BSNT_04656___    101 WEITLLSLLITLTPGTLVMDISDDRTILYIHAMDIEDAEKAIFDIRESFE    150
                     ||||.|:.||||||||||:||||||:||||||:||:||||||.|||.|||
BL02548___mrp    101 WEITTLANLITLTPGTLVVDISDDRSILYIHAVDIDDAEKAISDIRISFE    150

BSNT_04656___    151 KAIQEVSR    158
                     :||:||||
BL02548___mrp    151 EAIKEVSR    158


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.