Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04656 and BL02548
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:48
# Commandline: needle
# -asequence dna-align/BSNT_04656___mrpE.1.5803.seq
# -bsequence dna-align/BL02548___mrpE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04656___mrpE-BL02548___mrpE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04656___mrpE-BL02548___mrpE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04656___mrpE
# 2: BL02548___mrpE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 507
# Identity: 335/507 (66.1%)
# Similarity: 335/507 (66.1%)
# Gaps: 60/507 (11.8%)
# Score: 978.5
#
#
#=======================================
BSNT_04656___ 1 ATGGCTTTTCAAATTTTATTAAATGTGTTTCTCGCTTTTTGCTGGATG-T 49
|||||.||.|||||.||.||.||..|..||||.||.||.||||||||| |
BL02548___mrp 1 ATGGCATTACAAATATTGTTGAACTTTATTCTTGCGTTGTGCTGGATGTT 50
BSNT_04656___ 50 TCTTAAGCAACAGTCCA-AGCGCCGCAGGCTTCATTACAGGCTATATTCT 98
|||.|| ||| .|.|.| |.|||.||.||.||..|.|..||.|||.|..|
BL02548___mrp 51 TCTGAA-CAA-TGACTACACCGCTGCCGGGTTTGTCATCGGTTATGTGAT 98
BSNT_04656___ 99 GGGAATGCTCTCTCTCTTTTTCTTCCGGCGCTTTTTCACTCGCCAGTTTT 148
.|||.|..||||.||||||.|..|..||||.||||||...||||..||||
BL02548___mrp 99 CGGATTATTCTCGCTCTTTCTGATGAGGCGTTTTTTCCGCCGCCGCTTTT 148
BSNT_04656___ 149 ATCTATGGAAATT--GATTT---CTATCATCAAGCT-CTGTTTCATTTTT 192
| || || ||| .|||| |.|||.|||..|| |||||| ||||||
BL02548___mrp 149 A-CT-TG---ATTAACATTTGGGCGATCGTCAGACTGCTGTTT-ATTTTT 192
BSNT_04656___ 193 ATAAAGGAACT-GTACCTTGCCAATGTCAGTGTGATGAAA-TCAGTCTTA 240
||.||.||.|| || .||.||.||.|||||.|| ||.||| .|..||||.
BL02548___mrp 193 ATTAAAGAGCTCGT-GCTGGCAAACGTCAGCGT-ATTAAAGACGATCTTG 240
BSNT_04656___ 241 TCTCC------AAAACTGAATATCAGACCGGGTATTTTTGCTTTTAAAAC 284
||.|| |||| |||| || ||.||.|||||.||.||.||.||
BL02548___mrp 241 TCACCGCGGTTAAAA---AATA--AG-CCCGGCATTTTCGCCTTCAAGAC 284
BSNT_04656___ 285 TGAACTGACGAA--GGACTGGGAAATCAC------------CCTGCTTTC 320
.||.||.| || ||||||||||||||| ||||
BL02548___mrp 285 AGATCTTA--AAGCGGACTGGGAAATCACGACGTTGGCAAACCTG----- 327
BSNT_04656___ 321 TCTGCTCATTACATTAACGCCGGGAACCTTGGTGATGGATATTTCAGATG 370
|||||..|.||.|||||.||.|||||..|.|||||.||.||||
BL02548___mrp 328 -------ATTACGCTGACACCGGGCACATTGGTCGTCGATATCTCCGATG 370
BSNT_04656___ 371 ACAGAACAATACTTTATATTCATGCAATGGATATCGAGGATGCGGAAAAA 420
||.|..|.||.||||||||||||||..|.||||||||.|||||.||.|||
BL02548___mrp 371 ACCGTTCGATTCTTTATATTCATGCGGTCGATATCGATGATGCCGAGAAA 420
BSNT_04656___ 421 GCGATTTTTGACATTCGGGAGTCATTTGAAAAAGCCATACAGGAGGTGAG 470
||.||...|||.||.||....||.||||||.|.|||||..|||||||.||
BL02548___mrp 421 GCCATCAGTGATATCCGAATTTCGTTTGAAGAGGCCATTAAGGAGGTAAG 470
BSNT_04656___ 471 CCGGTGA 477
|||.|||
BL02548___mrp 471 CCGCTGA 477
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