Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04628 and BL02531

See DNA alignment / Visit BSNT_04628 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:46
# Commandline: needle
#    -asequence pep-align/BSNT_04628___yugF.1.5803.seq
#    -bsequence pep-align/BL02531___yugF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04628___yugF-BL02531___yugF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04628___yugF-BL02531___yugF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04628___yugF
# 2: BL02531___yugF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity:     184/274 (67.2%)
# Similarity:   235/274 (85.8%)
# Gaps:           2/274 ( 0.7%)
# Score: 1023.0
# 
#
#=======================================

BSNT_04628___      1 MEAVSPIRRFTVDGVNVYYEHYQNPGRQTLVCVHGFLSSAFSFRKVIPLL     50
                     |....|... |:.|||:|||||:|||:.:||.:||||||:|.:||:||||
BL02531___yug      1 MLLTKPSIE-TIQGVNIYYEHYENPGKTSLVLIHGFLSSSFCYRKIIPLL     49

BSNT_04628___     51 RDKYDIIALDLPPFGQSEKSRTFIYTYQNLAKLVIGILEHLQVKQAVLVG    100
                     :|:::::|:|||||||||||.||:|||||:|::||.::|.|::|.|||||
BL02531___yug     50 KDEFNLVAVDLPPFGQSEKSSTFVYTYQNMARVVIELIERLKIKDAVLVG     99

BSNT_04628___    101 HSMGGQISLSAALQKPELFSKVVLLCSSGYLKRSHPTIIFGTHIPYFHLY    150
                     |||||||||.|..::||||.||||||||||||||..::|||:|||||:||
BL02531___yug    100 HSMGGQISLYAIKERPELFKKVVLLCSSGYLKRSPRSLIFGSHIPYFYLY    149

BSNT_04628___    151 IKRWLSKEGVMKNLLNVVHDKSLIDEEMIDGYGRPFQDEQIFKAMTRFIR    200
                     |||||||:||:|||:|||:|.||||:|||:||.:||.|:|||:|:.|.||
BL02531___yug    150 IKRWLSKQGVLKNLMNVVYDSSLIDQEMINGYLKPFLDDQIFRALARLIR    199

BSNT_04628___    201 HREGDLEPEQLKKMNKPALLIWGEEDRIVPMEIGKRLHADLPNSVLYSLG    250
                     ||||||.|:.|||:..|:|||||||||:||::||||||.|||||:.|||.
BL02531___yug    200 HREGDLSPDDLKKIETPSLLIWGEEDRVVPVQIGKRLHQDLPNSIFYSLQ    249

BSNT_04628___    251 QTGHLVPEERPELVSEHIADFIN-    273
                     :||||||||.|:.||:.||:||. 
BL02531___yug    250 ETGHLVPEENPDYVSDKIANFILT    273


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