Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03829 and BL02525
See
DNA alignment /
Visit
BSNT_03829 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence pep-align/BSNT_03829___yqeB.1.5803.seq
# -bsequence pep-align/BL02525___yqeB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03829___yqeB-BL02525___yqeB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03829___yqeB-BL02525___yqeB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03829___yqeB
# 2: BL02525___yqeB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 83/240 (34.6%)
# Similarity: 137/240 (57.1%)
# Gaps: 16/240 ( 6.7%)
# Score: 437.0
#
#
#=======================================
BSNT_03829___ 1 MLQNQSHTLIGVTKTAVFFLYAALAIIGFAIGYFIPQIAKWALSLPWIPL 50
.|| .|:||::|......:....::|..:|:|:|.||.|.|::|.:|.
BL02525___yqe 1 --MNQ-ETIIGLSKIEKTLYWIIPPVLGAVLGWFLPVIADWVLTIPIVPF 47
BSNT_03829___ 51 EGPLRLVTSFQGSTAAFITALLGMCAGIWFAHSVIAMLLSVKITDHTVEF 100
:|||..:||......:.|.|.:|:.||::|:..:...:|.|.|:|..|:.
BL02525___yqe 48 KGPLEFITSLNSFWVSIIAAFIGIVAGLFFSQYIFTEILQVFISDQNVKL 97
BSNT_03829___ 101 IKGKKVQTIHSDDIALVFMDHKRLVLLGTAGYELVREEIDEKPVNVEKAF 150
:..:|.:.|...||:.::::.|.||:||..|.||.||:::.|....|.||
BL02525___yqe 98 LFKEKEEVIEKKDISAIYLEKKDLVVLGHKGTELYREQLESKRALAESAF 147
BSNT_03829___ 151 RQHHYEWAADGDPFKDQFRRWIPDAPDLSQGAHALLKARHKALQDEEKDD 200
:.|.|:| ||.||||::::||:.|.||.....:.||.||.:||.|.:.::
BL02525___yqe 148 KHHGYKW-ADEDPFKNEYQRWVADHPDFPSHINTLLLARERALLDNKHEE 196
BSNT_03829___ 201 IEEFRLELAQLGIVVRDEGTRQYWRKAETYPPKIQHGEGL 240
.:..|.:||:||:|::||..|||.|...
BL02525___yqe 197 AKILRKDLAKLGVVIQDEDKRQYVRMVS------------ 224
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.