Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05555 and BL02513
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence pep-align/BSNT_05555___rapD.1.5803.seq
# -bsequence pep-align/BL02513___rapD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05555___rapD-BL02513___rapD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05555___rapD-BL02513___rapD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05555___rapD
# 2: BL02513___rapD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 129/372 (34.7%)
# Similarity: 218/372 (58.6%)
# Gaps: 20/372 ( 5.4%)
# Score: 629.5
#
#
#=======================================
BSNT_05555___ 1 MISKFIEKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKLW 50
|......:.:.|||::||..|.||.::....:|:.||:.:.|::::..:.
BL02513___rap 1 MAKAVASQEVANMLNDWYILMKKRDISGSIEMKDDIDKAIEKMEEDHDVL 50
BSNT_05555___ 51 MRYQLFQARHQLLFE--NQNGLDSLFDDLYGLEDK----MDDELKYYLYF 94
:.||:...|.:||.| :|:..:.| :....:|| .||:|.||.|.
BL02513___rap 51 LYYQMLDFRLRLLLEDISQSSTEKL--EAISFKDKDPKSTDDKLNYYFYL 98
BSNT_05555___ 95 FSGLYEMVKTAPKHAVHHFKKAEQYLAAIQNTFEAADLYYQTAGAYYLMK 144
|.|:||..|.....|::.|:.||:.|:.|||..|.|:.:|:....||.:|
BL02513___rap 99 FKGIYEDYKQNHTEALNFFRIAEKRLSVIQNEIEKAEFHYKIGVLYYNLK 148
BSNT_05555___ 145 SPPLSIQYVKKALHIYLHQFGYIKKVITCKLLLAVNYIDQERYEKAEQLF 194
:..|||.::..|..|:....||.|:||.||:|:.:|||||.::.::|.|.
BL02513___rap 149 ATWLSIHHINIASGIFQGYDGYAKRVINCKMLIGLNYIDQFKFAESEVLL 198
BSNT_05555___ 195 KEIIKKTQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKNQEFE 244
||.|:||:::.|:.||.:.|||:||||:.|.|.:|||.|:.|....::||
BL02513___rap 199 KEAIEKTEKIGDQYLLPYTYYNMGFLKSKEDKHEEALKYYNKAFAIKDFE 248
BSNT_05555___ 245 MNSPVSYLHCVYESVRALFKTGNITEAKAVLQKGKELSEKVDIQTIYLKL 294
..:..:||.||||:.|:||||.:..:|...:..|.:.:::|:.:...||.
BL02513___rap 249 TKAKYAYLLCVYENTRSLFKTNDPDQAFKWIDTGFKKAQEVNSEIFELKF 298
BSNT_05555___ 295 KTLEALYTSVEDPYEQLLEYVLELEKIEAWVDLEVLLEDITEYYKKKDDF 344
|||..|::..::..|.:.:::.:||..:||||||.||.|:..||::...:
BL02513___rap 299 KTLYTLHSDCQNKLEVIKDFIHQLEDKKAWVDLEELLMDVANYYRENKLY 348
BSNT_05555___ 345 EKAAFFIMRG------------ 354
|:|.:|.::.
BL02513___rap 349 EEAIYFYIKTDKASKLAGRGGE 370
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