Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05554 and BL02496

See DNA alignment / Visit BSNT_05554 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:40
# Commandline: needle
#    -asequence pep-align/BSNT_05554___ywpB.1.5803.seq
#    -bsequence pep-align/BL02496___fabZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05554___ywpB-BL02496___fabZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05554___ywpB-BL02496___fabZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05554___ywpB
# 2: BL02496___fabZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:     123/144 (85.4%)
# Similarity:   133/144 (92.4%)
# Gaps:           3/144 ( 2.1%)
# Score: 655.0
# 
#
#=======================================

BSNT_05554___      1 MLDTQQIKEIIPHRYPFLLVDRITEVEEGKRAKGYKNVTANEEFFNGHFP     50
                     |||.||||||||||||||||||:|||||||||.||||||.||||||||||
BL02496___fab      1 MLDAQQIKEIIPHRYPFLLVDRVTEVEEGKRAAGYKNVTVNEEFFNGHFP     50

BSNT_05554___     51 QYPVMPGVLIVEALAQVGAVAMLIKEENRGRLAFFAGIDNCRFKKQVKPG    100
                     .||||||||||||||||||||:|:|||||||||||||||:||||||||||
BL02496___fab     51 DYPVMPGVLIVEALAQVGAVALLMKEENRGRLAFFAGIDSCRFKKQVKPG    100

BSNT_05554___    101 DQLHLEVEIIRARGTIGRGKGVATVDGEVVCEVELTFALGE---    141
                     ||||||:|::|.||:||:|||||.||||||||.||.|:|||   
BL02496___fab    101 DQLHLELEVLRFRGSIGKGKGVAKVDGEVVCEAELMFSLGEKQE    144


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.