Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05554 and BL02496
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:40
# Commandline: needle
# -asequence dna-align/BSNT_05554___ywpB.1.5803.seq
# -bsequence dna-align/BL02496___fabZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05554___ywpB-BL02496___fabZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05554___ywpB-BL02496___fabZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05554___ywpB
# 2: BL02496___fabZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 328/435 (75.4%)
# Similarity: 328/435 (75.4%)
# Gaps: 9/435 ( 2.1%)
# Score: 1234.0
#
#
#=======================================
BSNT_05554___ 1 ATGCTTGATACTCAGCAAATTAAAGAAATTATTCCTCACCGTTATCCGTT 50
|||||||||.|||||||||||||||||||.|||||.|||||.|||||.||
BL02496___fab 1 ATGCTTGATGCTCAGCAAATTAAAGAAATCATTCCCCACCGCTATCCCTT 50
BSNT_05554___ 51 TTTGCTTGTGGATCGGATTACGGAAGTTGAAGAGGGCAAACGGGCAAAAG 100
|.||||.||.||.||..|.||.|||||.||.||.||.||||||||....|
BL02496___fab 51 TCTGCTGGTAGACCGTGTGACAGAAGTAGAGGAAGGAAAACGGGCCGCGG 100
BSNT_05554___ 101 GCTATAAAAATGTAACCGCTAATGAAGAGTTCTTTAACGGACATTTTCCT 150
|.|||||||||||.||.|..|||||||||||.|||||||||||.|||||.
BL02496___fab 101 GTTATAAAAATGTGACAGTAAATGAAGAGTTTTTTAACGGACACTTTCCG 150
BSNT_05554___ 151 CAGTACCCGGTTATGCCCGGCGTATTAATCGTAGAAGCACTCGCTCAAGT 200
.|.||.|||||.|||||.||.||.|||||.||.|||||.||.||.|||||
BL02496___fab 151 GATTATCCGGTGATGCCTGGTGTTTTAATTGTTGAAGCGCTTGCGCAAGT 200
BSNT_05554___ 201 CGGAGCTGTTGCGATGTTGATTAAAGAAGAAAACCGCGGCAGACTGGCTT 250
.||.||.||.|||.|.|||||.||.||||||||||||||.||.||.||.|
BL02496___fab 201 AGGTGCGGTGGCGCTTTTGATGAAGGAAGAAAACCGCGGAAGGCTCGCGT 250
BSNT_05554___ 251 TTTTTGCAGGCATTGATAACTGCCGCTTTAAAAAACAAGTCAAGCCTGGT 300
|||||||.||.|||||.|.|||||||||.|||||.||.||.||.||.||.
BL02496___fab 251 TTTTTGCGGGAATTGACAGCTGCCGCTTCAAAAAGCAGGTGAAACCGGGC 300
BSNT_05554___ 301 GACCAGCTTCACCTTGAGGTTGAAATCATTCGTGCCCGCGGCACAATCGG 350
||.|||||.||.||||||.|||||.|..|||||..||||||..|.|||||
BL02496___fab 301 GATCAGCTCCATCTTGAGCTTGAAGTGCTTCGTTTCCGCGGTTCCATCGG 350
BSNT_05554___ 351 GCGCGGAAAAGGCGTTGCCACAGTTGATGGCGAAGTCGTTTGCGAAGTAG 400
....||||||||.||.||.|.|||.||.||.||||||||.||.||||..|
BL02496___fab 351 CAAAGGAAAAGGAGTCGCAAAAGTGGACGGAGAAGTCGTGTGTGAAGCCG 400
BSNT_05554___ 401 AACTGACTTTTGCCCTCGG---------AGAATAA 426
||.|||..|||.|.||.|| .||||||
BL02496___fab 401 AATTGATGTTTTCTCTTGGTGAAAAGCAGGAATAA 435
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