Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05541 and BL02485

See DNA alignment / Visit BSNT_05541 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:40
# Commandline: needle
#    -asequence pep-align/BSNT_05541___glcR.1.5803.seq
#    -bsequence pep-align/BL02485___glcR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05541___glcR-BL02485___glcR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05541___glcR-BL02485___glcR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05541___glcR
# 2: BL02485___glcR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     191/267 (71.5%)
# Similarity:   226/267 (84.6%)
# Gaps:          11/267 ( 4.1%)
# Score: 986.0
# 
#
#=======================================

BSNT_05541___      1 MIAEKRNEGVYQEERLVAILDFLKQHNRITTEQICTLLQVSRDTARRDLV     50
                              :||||||::|:|:||:|.||:.||||:|..|||||||||||
BL02485___glc      1 ---------MYQEERLISIIDYLKEHKRISVEQICSLFGVSRDTARRDLV     41

BSNT_05541___     51 KLEEQNAIIRTRGGAILPTVHQKIQSYSGRLKTVSEEKNKIGRLAASLIH    100
                     ||:||.|||||||||||||||.:::.|||||..|||||:.||:.|||||.
BL02485___glc     42 KLQEQGAIIRTRGGAILPTVHDEVKDYSGRLGMVSEEKSMIGKAAASLIR     91

BSNT_05541___    101 DGDRVILDASTTVQACAKHLNAVDCTVITNSINLADVLSDKEGIEIYLLG    150
                     :|||:|||||||||:||:||..|:||:||||||||||||.::|.:|.|||
BL02485___glc     92 EGDRIILDASTTVQSCAEHLPDVNCTIITNSINLADVLSSRKGADIRLLG    141

BSNT_05541___    151 GKLEKEHRFLYGSSVIEKLSSYHVDKALIGVVGISEHGITIAHEEDGMVK    200
                     |||:||||||||:|||||||.||||||||||||:||||:|||||||||||
BL02485___glc    142 GKLQKEHRFLYGASVIEKLSCYHVDKALIGVVGVSEHGLTIAHEEDGMVK    191

BSNT_05541___    201 RKMIQQAKQVIALADHSKLGSTSFYQYAELNEIDLLITDRLPNQAFCDLL    250
                     ||||.|||||||||||||:|.|.||:||||::||||||||||::.|..||
BL02485___glc    192 RKMISQAKQVIALADHSKIGRTDFYRYAELSDIDLLITDRLPSKPFQKLL    241

BSNT_05541___    251 DRNGVELLVTEQDEGKD    267
                     |.:.|||||.|..:.  
BL02485___glc    242 DEHDVELLVAEHHDT--    256


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