Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05540 and BL02484

See DNA alignment / Visit BSNT_05540 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:40
# Commandline: needle
#    -asequence pep-align/BSNT_05540___ywpJ.1.5803.seq
#    -bsequence pep-align/BL02484___ywpJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05540___ywpJ-BL02484___ywpJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05540___ywpJ-BL02484___ywpJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05540___ywpJ
# 2: BL02484___ywpJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 292
# Identity:     186/292 (63.7%)
# Similarity:   235/292 (80.5%)
# Gaps:           7/292 ( 2.4%)
# Score: 972.0
# 
#
#=======================================

BSNT_05540___      1 MKLIAIDLDGTLLNSKHQVSLENENALRQAQLDGIEVVVSTGRAHFDVMS     50
                     ||:||:|||||||||:.::|.:|.:|:::|:..||||||:||||.|||.:
BL02484___ywp      1 MKMIAVDLDGTLLNSESKISKKNIDAIKKAREHGIEVVVATGRASFDVQT     50

BSNT_05540___     51 IFEPLGIKTWVISANGAVIHDPDGRLYHHETIDKKRAYDILSWLESENYY    100
                     ||||.|||||:|||||||||||:|.|||...:|:|||..||.|||..|||
BL02484___ywp     51 IFEPTGIKTWIISANGAVIHDPEGSLYHSVPLDRKRAEGILRWLEENNYY    100

BSNT_05540___    101 YEVFTGSAIYTPQNGRELLDVELDRFRSANPETDLSVLKQAAEVQYSQSG    150
                     ||||:..||:||||||||||:||||.:|||||.|||.|:.|||.|.||:|
BL02484___ywp    101 YEVFSDEAIFTPQNGRELLDIELDRLKSANPEADLSRLELAAEQQLSQNG    150

BSNT_05540___    151 FAYINSFQELFEADQPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSS    200
                     :|||:|:.:||.|.:.::.||||.|||.|||||.||:::|.|:|:|||:|
BL02484___ywp    151 YAYISSYTDLFLAGKDVNVYNILAFSFHKEKLETGWRQFEDAQDITLVTS    200

BSNT_05540___    201 AEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK    250
                     ||||||:...:||||.||::|:.:|.|.|:|||||||||||.|||:.|||
BL02484___ywp    201 AEHNFEIEHLQASKGLALEKLSHKLGISLQETAAVGDSLNDFSMLKIAGK    250

BSNT_05540___    251 GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHLM-------    285
                     ..||||||.|||.:||.|||||||:||||::..|:       
BL02484___ywp    251 SFAMGNARGDIKEMADEVTLTNDENGVAHILHQLIEQQVKPV    292


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