Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05534 and BL02483

See DNA alignment / Visit BSNT_05534 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:39
# Commandline: needle
#    -asequence pep-align/BSNT_05534___ywqC.1.5803.seq
#    -bsequence pep-align/BL02483___ywqC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05534___ywqC-BL02483___ywqC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05534___ywqC-BL02483___ywqC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05534___ywqC
# 2: BL02483___ywqC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     106/250 (42.4%)
# Similarity:   154/250 (61.6%)
# Gaps:          12/250 ( 4.8%)
# Score: 477.0
# 
#
#=======================================

BSNT_05534___      1 MGESTSLKEILSTLTKRILLIMIVTAAATAAGGLISFFALTPIYENSTQI     50
                     |.:....|::...|.||.:||.::|.||..:...::|:.|.|:|:.|.||
BL02483___ywq      1 MRDHIGFKDVFIVLKKRFVLIALITIAAALSSAAVNFYWLKPVYQASAQI     50

BSNT_05534___     51 LVNQSKNERKEVQFNDVQTNLQLINTYNVIIKSPAILDEVIKEMGLSMTS    100
                     |:    |.|:...|.|:||||:||||||||:|||.||::|..|:.||.|:
BL02483___ywq     51 LI----NGRQTSNFTDIQTNLELINTYNVIMKSPIILNKVKDELNLSETA     96

BSNT_05534___    101 QELNDKITVSSEQDSQVVNISVRDENAETAAHIANTIASVFQDKITSIMN    150
                     ::|..||||.||.:||:|:||..|::...||.||||:|:|||..|..||.
BL02483___ywq     97 EDLKQKITVISENESQIVSISATDKDYSKAADIANTVAAVFQRDIGDIMG    146

BSNT_05534___    151 VD-NVSILSKAEVSEHPSPVSPKPLLNIAIAFAAGLAGSIGLAFLLEHLD    199
                     .: .:|:::||.....|.||||....|||:....||....|||||||.|.
BL02483___ywq    147 ENAEISLVAKANPDHSPVPVSPNKKFNIALFTGFGLLFGAGLAFLLELLK    196

BSNT_05534___    200 NTIKSEEQLESLLDIPVLGTVSTIANEQKTAKTLQGFQSEKTGSGH-FGA    248
                     ||:::||.:|..|::.|||.:..:..::..|:.|:.|    .|..| |  
BL02483___ywq    197 NTVRNEEDIEKDLNVHVLGNILYVKPKKGQARKLESF----VGKDHTF--    240


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