Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05506 and BL02481
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence pep-align/BSNT_05506___ywrD.1.5803.seq
# -bsequence pep-align/BL02481___ywrD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05506___ywrD-BL02481___ywrD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05506___ywrD-BL02481___ywrD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05506___ywrD
# 2: BL02481___ywrD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 527
# Identity: 361/527 (68.5%)
# Similarity: 428/527 (81.2%)
# Gaps: 2/527 ( 0.4%)
# Score: 1939.5
#
#
#=======================================
BSNT_05506___ 1 MNRSVIGTKQMVVSPHYLASQAGNRILDKGGNAFDAAVAVSACLAVVYPH 50
|.:..||:||||||||||||.||:.|::||||||||||||||||||||||
BL02481___ywr 1 MEKLKIGSKQMVVSPHYLASLAGSIIMEKGGNAFDAAVAVSACLAVVYPH 50
BSNT_05506___ 51 MTGLGGDSFWLTFHQETKAVKVYNGSGRSGKNVTRDVYKGKSAIPLRGID 100
|||||||:|||.:|..:..:|.||||||||:...||.|||:.|||:||..
BL02481___ywr 51 MTGLGGDAFWLMYHNGSGEIKGYNGSGRSGRKADRDQYKGERAIPVRGPR 100
BSNT_05506___ 101 SAITVPGMVDSWDAVLKEYGRLSLADVLEPARDYAQNGFPVSADQCRHTE 150
||||||||||||..:|..||||||.:||:||..||:.|||||.|||::|.
BL02481___ywr 101 SAITVPGMVDSWAEILAAYGRLSLREVLKPAIMYAEKGFPVSPDQCQNTV 150
BSNT_05506___ 151 KNIELLASTPYTADIFTRRGKAPVPGERFLQKELADSLNVIAEKGRSAFY 200
||.|.|:..|.||||:...||.|.|||||:|||||.:|.:||||||..||
BL02481___ywr 151 KNAEWLSCMPITADIYLPGGKPPSPGERFVQKELARTLTLIAEKGRDTFY 200
BSNT_05506___ 201 EGDLAQRIVSHLQNNGSYMTIDDFKAHRGEWAAPVSSDYRGYSVYQAPPN 250
:|::||.:.::|||||..:.::||..|||||.:|:||.||||::||.|||
BL02481___ywr 201 KGEIAQALAAYLQNNGGILNLEDFGLHRGEWVSPLSSTYRGYAIYQMPPN 250
BSNT_05506___ 251 SQGFTGLLTLNILENYDFTQIEHGSFEYYHVLVEALKKSFVDRNAFLTDP 300
|||||||:||||||||||..||||||||||:|:||||.||.|.|..||||
BL02481___ywr 251 SQGFTGLMTLNILENYDFGMIEHGSFEYYHLLIEALKLSFSDCNKVLTDP 300
BSNT_05506___ 301 AFADIPLERLLDKNYAKRLAGEIGYLAEPAESRPVGSDTAYAAVIDADGN 350
.|:.|||.|||||.||:.||.:||..|..|||||:||||:|||.:|.|||
BL02481___ywr 301 EFSQIPLGRLLDKEYARELAAKIGLPALQAESRPLGSDTSYAAAVDEDGN 350
BSNT_05506___ 351 AVSFIQSLYFEFGSAVTAGDTGILLQNRGSFFSLDENHVNTLEPRKRTFH 400
||||||||||||||.|||||||::|||||:|||||.:|||||||.|||||
BL02481___ywr 351 AVSFIQSLYFEFGSGVTAGDTGVILQNRGAFFSLDPDHVNTLEPGKRTFH 400
BSNT_05506___ 401 TLMPAMVCKGGKPKILYGT--QGGEGQPQTQTAIITRMLDYGMHPQQAIS 448
||||||..:|||||.|||| ||||||||||||:||||:||||.||.|:.
BL02481___ywr 401 TLMPAMAFRGGKPKFLYGTQGQGGEGQPQTQTALITRMVDYGMDPQTAVH 450
BSNT_05506___ 449 EPRWVWGRTWGEEYEGLRVEGRFTDKTIQKLKDSGHLVEVVGDYDPLMGQ 498
||||||||||||..||:|:|.|...:.|.||:..||.|.|||::|.:||.
BL02481___ywr 451 EPRWVWGRTWGERVEGVRIESRVAPEVIAKLRKHGHHVTVVGEFDGVMGH 500
BSNT_05506___ 499 AAAIKVDEEGFLQGGADPRGDGAAVGI 525
|..|::|::|||:||:|||.||||:||
BL02481___ywr 501 AGIIEIDDQGFLRGGSDPRSDGAAIGI 527
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